Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os04t0471300-01 | |
| Os06t0101800-01 | |
| Os08t0497900-01 | |
| Os09t0481300-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G25190.1 | Os06t0101800-01 | AT1G01010.1 | 21798944 |
| AT3G25190.1 | Os04t0471300-01 | AT4G26455.1 | 21798944 |
| AT3G25190.1 | Os08t0497900-01 | AT4G26455.1 | 21798944 |
| AT3G25190.1 | Os09t0481300-01 | AT4G26455.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 74.52 | 80.73 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 48.08 | 80.0 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 78.85 | 79.61 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 77.88 | 78.26 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 76.44 | 75.71 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 77.4 | 75.23 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 76.44 | 75.0 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 75.48 | 74.76 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 75.48 | 74.76 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 75.48 | 74.76 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 75.48 | 74.76 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 75.0 | 74.29 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 64.9 | 74.18 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 75.0 | 73.58 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 79.81 | 72.49 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 69.71 | 68.4 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 71.63 | 65.07 |
| Bra008277.1-P | Field mustard | cytosol, peroxisome, vacuole | 59.62 | 63.92 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 59.62 | 63.92 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 62.5 | 63.73 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 59.13 | 63.4 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 59.13 | 63.4 |
| Bra015718.1-P | Field mustard | cytosol, peroxisome, vacuole | 59.13 | 63.4 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 58.65 | 62.89 |
| AT1G76800.1 | Thale cress | cytosol, peroxisome, plasma membrane | 57.69 | 61.22 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 57.21 | 59.5 |
| Bra012271.1-P | Field mustard | cytosol, peroxisome, vacuole | 57.21 | 59.5 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 56.25 | 58.5 |
| KRH35158 | Soybean | plasma membrane | 55.29 | 58.08 |
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 55.77 | 58.0 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 54.33 | 57.95 |
| AT3G43660.1 | Thale cress | cytosol, peroxisome, vacuole | 54.81 | 57.58 |
| Bra016431.1-P | Field mustard | cytosol | 30.29 | 57.27 |
| Bra025879.1-P | Field mustard | cytosol, peroxisome, vacuole | 55.29 | 57.21 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 55.29 | 57.21 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 55.29 | 57.21 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 57.21 | 56.67 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 54.33 | 56.5 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 55.29 | 56.1 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 42.79 | 55.28 |
| Solyc04g051180.1.1 | Tomato | extracellular | 43.75 | 55.15 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 55.77 | 54.46 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 54.81 | 54.29 |
| PGSC0003DMT400008929 | Potato | cytosol, peroxisome, vacuole | 59.13 | 54.19 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 55.77 | 53.95 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 55.29 | 53.49 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 55.77 | 53.46 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 56.25 | 53.42 |
| VIT_18s0076g00320.t01 | Wine grape | cytosol, peroxisome, vacuole | 56.73 | 53.39 |
| KRH42214 | Soybean | extracellular | 42.31 | 53.33 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 56.25 | 52.47 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 54.81 | 52.29 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 56.25 | 52.23 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 49.04 | 52.04 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 54.81 | 51.58 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 57.69 | 51.5 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 53.85 | 51.14 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 53.37 | 50.68 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 53.37 | 50.68 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 52.4 | 50.23 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 52.88 | 50.23 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 50.96 | 50.0 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 55.29 | 50.0 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 54.81 | 49.78 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 37.98 | 49.69 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 55.29 | 49.36 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 51.44 | 49.31 |
| Os02t0644200-01 | Rice | cytosol, peroxisome | 30.29 | 49.22 |
| KRH42212 | Soybean | plasma membrane | 54.33 | 49.13 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 56.25 | 48.95 |
| KRH58337 | Soybean | plasma membrane | 53.37 | 48.47 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 51.92 | 48.43 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 49.04 | 48.34 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 48.08 | 48.31 |
| GSMUA_Achr10P... | Banana | plasma membrane | 60.58 | 48.09 |
| KRH58340 | Soybean | plasma membrane | 53.37 | 47.03 |
| KRH10486 | Soybean | plasma membrane | 39.42 | 44.32 |
| Os04t0538400-01 | Rice | mitochondrion, nucleus, plastid | 49.04 | 41.3 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 35.58 | 41.11 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 39.42 | 39.81 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 37.5 | 38.24 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 32.21 | 31.9 |
Protein Annotations
| MapMan:24.2.12.3 | EntrezGene:4337475 | EMBL:AK243145 | ProteinID:BAF16244.2 | ProteinID:BAS91743.1 | ProteinID:BAT12806.1 |
| ProteinID:CAD41933.2 | InterPro:Ccc1_fam | ProteinID:EAZ32489.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 |
| GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006880 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0030026 | GO:GO:0034755 | GO:GO:0055072 |
| GO:GO:0071281 | GO:GO:0071421 | EnsemblPlantsGene:Os04g0686800 | EnsemblPlants:Os04t0686800-01 | PFAM:PF01988 | PANTHER:PTHR31851 |
| PANTHER:PTHR31851:SF30 | UniProt:Q7XTL7 | TMHMM:TMhelix | UniParc:UPI00006E273A | RefSeq:XP_015634483.1 | SEG:seg |
Description
Similar to H0701F11.2 protein. (Os04t0686800-01)
Coordinates
chr4:+:35111460..35112512
Molecular Weight (calculated)
20982.7 Da
IEP (calculated)
8.503
GRAVY (calculated)
0.623
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAMMNNERS SSNKLQVDAE NPAAVGDELD LAARANWLRA AVLGANDGLV STASLMLGVG AVKAEARAMV ISGFAGLLAG ACSMAIGEFV SVCSQRDVEL
101: AQLERDGKRG GEEEKALPSP AQAAAASAMA FSVGAVVPLL AAGFIVNYRL RIAVVVAVAS VALAAFGCVG AVLGRAAVAR SSARVVLGGW AAMGITFGLM
201: RLFKASGI
101: AQLERDGKRG GEEEKALPSP AQAAAASAMA FSVGAVVPLL AAGFIVNYRL RIAVVVAVAS VALAAFGCVG AVLGRAAVAR SSARVVLGGW AAMGITFGLM
201: RLFKASGI
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.