Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 98.46 | 96.0 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 85.64 | 83.5 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 85.13 | 82.59 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 85.13 | 82.59 |
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 82.56 | 80.5 |
| AT3G43660.1 | Thale cress | cytosol, peroxisome, vacuole | 81.03 | 79.8 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 85.13 | 79.05 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 73.33 | 73.71 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 73.33 | 73.71 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 73.33 | 73.71 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 72.82 | 73.2 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 68.21 | 61.29 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 66.15 | 60.85 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 63.59 | 60.78 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 66.67 | 59.91 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 57.44 | 58.33 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 58.97 | 55.83 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 34.87 | 54.4 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 57.95 | 54.33 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 56.41 | 53.14 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 57.95 | 52.8 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 56.41 | 52.38 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 56.41 | 52.38 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 56.41 | 52.38 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 55.9 | 51.9 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 55.38 | 51.43 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 55.38 | 51.43 |
| KRH10486 | Soybean | plasma membrane | 48.72 | 51.35 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 57.44 | 51.14 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 47.69 | 51.1 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 55.38 | 50.94 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 55.38 | 50.94 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 56.41 | 50.23 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 50.77 | 49.75 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 53.33 | 49.06 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 56.92 | 48.47 |
| GSMUA_Achr10P... | Banana | plasma membrane | 63.59 | 47.33 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 55.38 | 47.16 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 50.26 | 44.34 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 50.26 | 43.75 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 44.62 | 42.03 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 49.74 | 40.93 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 50.77 | 36.8 |
Protein Annotations
| EnsemblPlants:CDY33672 | EnsemblPlantsGene:GSBRNA2T00055043001 | GO:A0A078H848 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 | PFAM:PF01988 | ProteinID:CDY33672 | ProteinID:CDY33672.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EC4A08 | UniProt:A0A078H848 | MapMan:24.2.12.3 | : |
Description
BnaC08g19720DBnaC08g19720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H848]
Coordinates
chrLK032319:+:387015..387602
Molecular Weight (calculated)
20515.5 Da
IEP (calculated)
9.397
GRAVY (calculated)
0.619
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNSLNIDME KDQETAFDYS KRSQWLRAAV LGAIDGLVST ASLMMGVGAV KPDFKTMILT GFAGLVAGAC SMAIGEFVSV YSQYDIEVAQ IKRENAGDIE
101: KEKLPNPMHA AAASVIAFFL GAVVPLLAAA PVKTYKVRVG VIVAAVTLAL VMFGWLGAVL GKAPVVKSSA RVLIGGWLAM AITYGLTRLF GSLGL
101: KEKLPNPMHA AAASVIAFFL GAVVPLLAAA PVKTYKVRVG VIVAAVTLAL VMFGWLGAVL GKAPVVKSSA RVLIGGWLAM AITYGLTRLF GSLGL
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [cytosol,peroxisome,vacuole]
SUBAcon: [cytosol,peroxisome,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.