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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, peroxisome, vacuole

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 2
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008277.1-P Field mustard cytosol, peroxisome, vacuole 98.45 98.45
CDY45946 Canola cytosol, peroxisome, vacuole 98.45 98.45
CDX87566 Canola cytosol, peroxisome, vacuole 94.85 94.85
CDX88318 Canola cytosol, peroxisome, vacuole 94.85 94.85
AT1G76800.1 Thale cress cytosol, peroxisome, plasma membrane 90.21 89.29
CDY71883 Canola cytosol, peroxisome, vacuole 80.41 78.0
CDY01332 Canola cytosol, peroxisome, vacuole 80.93 74.76
CDY29473 Canola cytosol, peroxisome, vacuole 77.32 74.63
CDY04601 Canola cytosol, peroxisome, vacuole 77.32 74.63
CDY33672 Canola cytosol, peroxisome, vacuole 73.71 73.33
CDX96601 Canola cytosol, peroxisome, vacuole 73.71 71.5
GSMUA_Achr9P29610_001 Banana cytosol, peroxisome, vacuole 65.98 62.75
Solyc01g104780.2.1 Tomato nucleus, peroxisome, vacuole 67.53 61.79
KRH43941 Soybean cytosol, peroxisome, vacuole 69.07 61.75
PGSC0003DMT400076498 Potato plasma membrane 68.04 60.83
TraesCS2D01G588000.1 Wheat cytosol, plasma membrane, vacuole 59.79 60.42
Os04t0686800-01 Rice cytosol, peroxisome, vacuole 63.4 59.13
TraesCS2B01G610400.1 Wheat cytosol, plasma membrane, vacuole 61.86 58.25
Zm00001d026679_P001 Maize cytosol, peroxisome, vacuole 61.86 57.97
Zm00001d002884_P001 Maize cytosol, plasma membrane, vacuole 62.37 56.54
TraesCS2A01G434100.1 Wheat cytosol, plasma membrane, vacuole 36.08 56.0
TraesCS2B01G455200.1 Wheat cytosol, plasma membrane, vacuole 58.76 54.29
TraesCS2B01G455100.1 Wheat cytosol, plasma membrane, vacuole 58.76 54.29
TraesCS2A01G434000.1 Wheat cytosol, plasma membrane, vacuole 58.76 54.29
TraesCS2D01G431900.1 Wheat cytosol, plasma membrane, vacuole 58.25 53.81
TraesCS2B01G455300.1 Wheat cytosol, plasma membrane, vacuole 58.76 53.77
TraesCS2A01G433900.1 Wheat cytosol, plasma membrane, vacuole 57.73 53.33
TraesCS2A01G434200.1 Wheat cytosol, plasma membrane, vacuole 57.73 53.33
TraesCS2B01G455000.1 Wheat cytosol, plasma membrane, vacuole 50.0 53.3
CDY15107 Canola cytosol, peroxisome, plasma membrane 59.79 52.97
TraesCS2D01G432000.1 Wheat cytosol, plasma membrane, vacuole 57.73 52.83
EES11692 Sorghum cytosol, peroxisome, vacuole 61.86 52.4
CDY52279 Canola cytosol, peroxisome, plasma membrane 58.76 52.05
KRH10486 Soybean plasma membrane 49.48 51.89
TraesCS2B01G454900.1 Wheat cytosol, plasma membrane, vacuole 54.64 50.0
TraesCS4A01G209600.1 Wheat plasma membrane 50.52 49.25
GSMUA_Achr10P... Banana plasma membrane 66.49 49.24
HORVU2Hr1G101180.2 Barley cytosol 57.22 48.47
Os11t0161900-00 Rice cytosol, nucleus, plasma membrane 48.45 45.41
TraesCS4D01G110600.1 Wheat cytosol, plasma membrane, vacuole 51.03 44.8
HORVU4Hr1G020210.1 Barley cytosol, peroxisome 50.52 43.75
OQU82931 Sorghum cytosol, peroxisome, plastid, vacuole 52.06 42.62
TraesCS4B01G112900.1 Wheat endoplasmic reticulum 51.03 36.8
Protein Annotations
EnsemblPlants:CDY20388EnsemblPlantsGene:GSBRNA2T00012413001GO:A0A078G6Y3GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Ccc1_famncoils:CoilPANTHER:PTHR31851PANTHER:PTHR31851:SF30PFAM:PF01988ProteinID:CDY20388
ProteinID:CDY20388.1SEG:segTMHMM:TMhelixUniParc:UPI0004EAD3BCUniProt:A0A078G6Y3MapMan:24.2.12.3
Description
BnaC02g24280DBnaC02g24280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6Y3]
Coordinates
chrLK032107:-:269687..270271
Molecular Weight (calculated)
20340.0 Da
IEP (calculated)
7.511
GRAVY (calculated)
0.542
Length
194 amino acids
Sequence
(BLAST)
001: MDQERNMDIE KESSTTLDYS KRAQWLRAAV LGANDGLVST ASLMMGVGAV KHDVKVMILS GFAGMVAGAC SMAIGEFVSV YSQYDIEVAQ MERESGEVEK
101: EKLPSPLQAA AASALAFSAG AIVPLLAAAF VKEYRVRIVA VVAAVTVALV VFGWLGATLG KAPAVRSSAR VLFGGWLAMA VTFGLTKLIG LHGL
Best Arabidopsis Sequence Match ( AT1G76800.1 )
(BLAST)
001: MDQSGSNTNM DIEKESTTFD YSKRSQWLRA AVLGANDGLV STASLMMGVG AVKHDVKAMI LSGFAGMVAG ACSMAIGEFV SVYSQYDIEV AQMERDSVEI
101: EKEKLPSPMQ AAAASALAFS AGAIVPLLAA AFVKEYKMRI ISVVVAVTVA LMVFGWLGAA LGKAPAVRSS ARVLFGGWLA MAVTFGLTKL IGLYGL
Arabidopsis Description
Vacuolar iron transporter homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRD3]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.