Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 98.97 | 98.97 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 96.39 | 96.39 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 94.85 | 94.85 |
| AT1G76800.1 | Thale cress | cytosol, peroxisome, plasma membrane | 92.27 | 91.33 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 79.9 | 77.5 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 80.41 | 74.29 |
| CDY04601 | Canola | cytosol, peroxisome, vacuole | 76.8 | 74.13 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 76.8 | 74.13 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 73.71 | 73.33 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 73.71 | 71.5 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 68.56 | 62.74 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 65.46 | 62.25 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 68.56 | 61.29 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 60.31 | 60.94 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 67.53 | 60.37 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 63.4 | 59.13 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 62.89 | 58.94 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 62.37 | 58.74 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 63.4 | 57.48 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 36.6 | 56.8 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 59.79 | 55.24 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 59.79 | 55.24 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 59.79 | 55.24 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 59.28 | 54.76 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 59.79 | 54.72 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 51.03 | 54.4 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 58.76 | 54.29 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 58.76 | 54.29 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 58.76 | 53.77 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 63.4 | 53.71 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 60.31 | 53.42 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 59.28 | 52.51 |
| KRH10486 | Soybean | plasma membrane | 50.0 | 52.43 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 55.67 | 50.94 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 58.25 | 49.34 |
| GSMUA_Achr10P... | Banana | plasma membrane | 66.49 | 49.24 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 50.0 | 48.74 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 47.42 | 44.44 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 50.0 | 43.89 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 49.48 | 42.86 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 50.52 | 41.35 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 50.0 | 36.06 |
Protein Annotations
| EnsemblPlants:CDX88318 | EnsemblPlantsGene:GSBRNA2T00147824001 | GO:A0A078DM15 | InterPro:Ccc1_fam | ncoils:Coil | PANTHER:PTHR31851 |
| PANTHER:PTHR31851:SF30 | PFAM:PF01988 | ProteinID:CDX88318 | ProteinID:CDX88318.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EEF172 | MapMan:24.2.12.3 | : | : | : | : |
Description
BnaC06g37620D
Coordinates
chrLK031855:+:315271..316030
Molecular Weight (calculated)
20314.0 Da
IEP (calculated)
8.434
GRAVY (calculated)
0.541
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQGRNMDIE KESTTTFDYS KRAQWLRAAV LGANDGLVST ASLMMGVGAV KHDVKAMILS GFAGMVAGAC SMAIGEFVSV YSQYDIEVAQ MERESGEVEK
101: EKLPSPLQAA AASALAFSVG AIVPLLAAAF VKEYRVRIIA VVTAVTVALV GFGWLGAALG KAPAVRSSAR VLFGGWLAMA VTFGLTKLIG LYGL
101: EKLPSPLQAA AASALAFSVG AIVPLLAAAF VKEYRVRIIA VVTAVTVALV GFGWLGAALG KAPAVRSSAR VLFGGWLAMA VTFGLTKLIG LYGL
001: MDQSGSNTNM DIEKESTTFD YSKRSQWLRA AVLGANDGLV STASLMMGVG AVKHDVKAMI LSGFAGMVAG ACSMAIGEFV SVYSQYDIEV AQMERDSVEI
101: EKEKLPSPMQ AAAASALAFS AGAIVPLLAA AFVKEYKMRI ISVVVAVTVA LMVFGWLGAA LGKAPAVRSS ARVLFGGWLA MAVTFGLTKL IGLYGL
101: EKEKLPSPMQ AAAASALAFS AGAIVPLLAA AFVKEYKMRI ISVVVAVTVA LMVFGWLGAA LGKAPAVRSS ARVLFGGWLA MAVTFGLTKL IGLYGL
Arabidopsis Description
Vacuolar iron transporter homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRD3]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.