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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, vacuole

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, mitochondrion, plasma membrane, vacuole
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G331000.1
TraesCS2B01G351300.1
TraesCS2D01G332000.1
TraesCS4A01G499900.1
TraesCS5A01G257000.1
TraesCS5B01G256500.1
TraesCS5D01G265600.1
TraesCS7A01G000300.1
TraesCS7A01G240200.1
TraesCS7B01G135800.1
TraesCS7D01G000200.1
TraesCS7D01G238200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G25190.1 TraesCS4A01G499900.1 AT1G01010.1 21798944
AT3G25190.1 TraesCS7A01G000300.1 AT1G01010.1 21798944
AT3G25190.1 TraesCS7D01G000200.1 AT1G01010.1 21798944
AT3G25190.1 TraesCS2A01G331000.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS2B01G351300.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS2D01G332000.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS5A01G257000.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS5B01G256500.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS5D01G265600.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS7A01G240200.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS7B01G135800.1 AT4G26455.1 21798944
AT3G25190.1 TraesCS7D01G238200.1 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G610400.1 Wheat cytosol, plasma membrane, vacuole 97.92 91.26
TraesCS2D01G431900.1 Wheat cytosol, plasma membrane, vacuole 85.42 78.1
TraesCS2D01G432000.1 Wheat cytosol, plasma membrane, vacuole 84.9 76.89
Os04t0686800-01 Rice cytosol, peroxisome, vacuole 80.73 74.52
Zm00001d026679_P001 Maize cytosol, peroxisome, vacuole 77.6 71.98
Zm00001d002884_P001 Maize cytosol, plasma membrane, vacuole 77.6 69.63
EES11692 Sorghum cytosol, peroxisome, vacuole 80.73 67.69
GSMUA_Achr9P29610_001 Banana cytosol, peroxisome, vacuole 65.62 61.76
Bra015718.1-P Field mustard cytosol, peroxisome, vacuole 60.94 60.31
CDY45946 Canola cytosol, peroxisome, vacuole 60.94 60.31
CDX88318 Canola cytosol, peroxisome, vacuole 60.94 60.31
Bra008277.1-P Field mustard cytosol, peroxisome, vacuole 60.94 60.31
Bra012271.1-P Field mustard cytosol, peroxisome, vacuole 62.5 60.0
CDX87566 Canola cytosol, peroxisome, vacuole 60.42 59.79
CDY20388 Canola cytosol, peroxisome, vacuole 60.42 59.79
CDY71883 Canola cytosol, peroxisome, vacuole 61.98 59.5
AT1G76800.1 Thale cress cytosol, peroxisome, plasma membrane 60.42 59.18
CDY33672 Canola cytosol, peroxisome, vacuole 58.33 57.44
CDY01332 Canola cytosol, peroxisome, vacuole 62.5 57.14
AT1G21140.1 Thale cress cytosol, peroxisome, plasma membrane 59.38 57.0
AT3G43630.1 Thale cress cytosol, peroxisome, plasma membrane 59.38 57.0
CDY29473 Canola cytosol, peroxisome, vacuole 59.38 56.72
Bra025879.1-P Field mustard cytosol, peroxisome, vacuole 59.38 56.72
CDY04601 Canola cytosol, peroxisome, vacuole 59.38 56.72
AT3G43660.1 Thale cress cytosol, peroxisome, vacuole 57.81 56.06
KRH35158 Soybean plasma membrane 57.29 55.56
CDX96601 Canola cytosol, peroxisome, vacuole 57.29 55.0
PGSC0003DMT400076566 Potato extracellular, plasma membrane, vacuole 45.83 54.66
Solyc04g051180.1.1 Tomato extracellular 46.35 53.94
Solyc01g104800.2.1 Tomato cytosol, peroxisome, plasma membrane 56.77 53.17
Bra016431.1-P Field mustard cytosol 30.21 52.73
CDY15107 Canola cytosol, peroxisome, plasma membrane 59.38 52.05
VIT_18s0076g00320.t01 Wine grape cytosol, peroxisome, vacuole 59.9 52.04
PGSC0003DMT400032701 Potato plasma membrane 57.29 51.64
Bra013226.1-P Field mustard cytosol, peroxisome, plasma membrane 58.33 51.14
CDY52279 Canola cytosol, peroxisome, plasma membrane 58.33 51.14
Solyc01g104810.2.1 Tomato plasma membrane 56.77 50.7
PGSC0003DMT400076565 Potato plasma membrane 56.77 50.7
AT3G25190.1 Thale cress cytosol, peroxisome, plastid 57.81 50.68
KRG91640 Soybean cytosol, peroxisome, vacuole 57.81 50.68
PGSC0003DMT400008929 Potato cytosol, peroxisome, vacuole 59.9 50.66
PGSC0003DMT400076567 Potato plasma membrane 55.21 50.48
VIT_12s0055g00870.t01 Wine grape cytosol, peroxisome, plasma membrane 58.85 50.45
Solyc01g104820.2.1 Tomato plasma membrane 56.77 50.23
KRH43941 Soybean cytosol, peroxisome, vacuole 56.77 50.23
KRH42213 Soybean cytosol, endoplasmic reticulum, plasma membrane 57.81 50.23
VIT_12s0055g00860.t01 Wine grape cytosol, peroxisome, plasma membrane 58.33 50.22
KRH08706 Soybean cytosol, peroxisome, vacuole 60.42 49.79
KRH42214 Soybean extracellular 42.71 49.7
PGSC0003DMT400076561 Potato cytosol, peroxisome, plasma membrane 56.25 49.54
KRH58338 Soybean cytosol, peroxisome, plasma membrane 50.52 49.49
KRH28884 Soybean cytosol, peroxisome, vacuole 58.85 49.13
KRH58337 Soybean plasma membrane 57.81 48.47
Solyc01g105260.1.1 Tomato extracellular, vacuole 40.1 48.43
KRH42212 Soybean plasma membrane 57.81 48.26
KRH70313 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 59.38 47.7
TraesCS4D01G110600.1 Wheat cytosol, plasma membrane, vacuole 54.69 47.51
KRH76566 Soybean cytosol, peroxisome, vacuole 57.29 47.21
Solyc01g104780.2.1 Tomato nucleus, peroxisome, vacuole 52.08 47.17
PGSC0003DMT400076498 Potato plasma membrane 53.12 47.0
TraesCS6D01G221100.1 Wheat cytosol, peroxisome, vacuole 55.21 45.89
KRH42215 Soybean cytosol, plastid, vacuole 54.69 45.85
TraesCS2D01G384100.1 Wheat cytosol, peroxisome, vacuole 54.69 45.45
VIT_12s0055g00850.t01 Wine grape cytosol, peroxisome, plasma membrane 49.48 45.02
KRH58339 Soybean cytosol, peroxisome, plasma membrane 52.08 44.84
TraesCS2D01G383900.1 Wheat cytosol, peroxisome, vacuole 53.65 44.59
KRH58340 Soybean plasma membrane 54.17 44.07
GSMUA_Achr10P... Banana plasma membrane 59.9 43.89
KRH10486 Soybean plasma membrane 41.67 43.24
PGSC0003DMT400076558 Potato cytosol, peroxisome, plasma membrane 41.67 38.84
KRH58336 Soybean peroxisome, plasma membrane, vacuole 35.94 38.33
Solyc01g104830.2.1 Tomato cytosol, peroxisome, plasma membrane 39.06 36.76
KRH42211 Soybean cytosol, plasma membrane, vacuole 34.9 31.9
Protein Annotations
EnsemblPlants:TraesCS2D01G588000.1EnsemblPlantsGene:TraesCS2D01G588000InterPro:Ccc1_famPANTHER:PTHR31851PANTHER:PTHR31851:SF30PFAM:PF01988
SEG:segTMHMM:TMhelixMapMan:24.2.12.3:::
Description
No Description!
Coordinates
chr2D:-:645661219..645661797
Molecular Weight (calculated)
19272.8 Da
IEP (calculated)
8.943
GRAVY (calculated)
0.768
Length
192 amino acids
Sequence
(BLAST)
001: MCRGGGIDSD SDVDFAGRAN WLRAAVLGAN DGLVSTASLM LGVGAVKHEV RAMVISGFAG LLAGACSMAI GEFVSVCSQR DVEIAQLDRD GKRGGDEERA
101: LPSPVQAAAA SALAFSVGAL LPLLAAGFIV GYKLRVAVVV AVATLALAAF GVVGAVLGRA PVVRSSARVV VGGLAAMGLT FGLMRLFRAS GI
Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [cytosol,peroxisome,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.