Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 89.04 | 89.04 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 89.04 | 89.04 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 89.04 | 89.04 |
| AT3G43660.1 | Thale cress | cytosol, peroxisome, vacuole | 57.53 | 63.64 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 56.16 | 61.5 |
| AT3G43630.1 | Thale cress | cytosol, peroxisome, plasma membrane | 55.71 | 61.0 |
| AT1G76800.1 | Thale cress | cytosol, peroxisome, plasma membrane | 54.34 | 60.71 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 44.29 | 60.25 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 60.27 | 59.73 |
| KRH42212 | Soybean | plasma membrane | 62.56 | 59.57 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 58.9 | 59.17 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 52.51 | 58.67 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 57.99 | 58.53 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 54.34 | 58.33 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 59.36 | 58.3 |
| KRH58337 | Soybean | plasma membrane | 60.73 | 58.08 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 50.68 | 57.81 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 56.62 | 57.67 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 60.27 | 57.39 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 56.16 | 57.21 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 54.79 | 57.14 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 53.42 | 57.07 |
| KRH42214 | Soybean | extracellular | 42.92 | 56.97 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 55.25 | 56.81 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 52.05 | 55.34 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 56.16 | 54.91 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 39.73 | 54.72 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 57.99 | 54.51 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 30.59 | 53.6 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 50.23 | 52.88 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 49.77 | 52.66 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 53.42 | 52.47 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 53.88 | 51.53 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 50.23 | 51.4 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 49.32 | 51.18 |
| KRH58340 | Soybean | plasma membrane | 54.34 | 50.42 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 47.95 | 50.0 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 41.55 | 50.0 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 47.95 | 50.0 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 47.95 | 49.53 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 47.49 | 49.52 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 47.49 | 49.52 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 47.49 | 49.06 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 47.03 | 49.05 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 47.03 | 49.05 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 50.23 | 48.03 |
| KRH58336 | Soybean | peroxisome, plasma membrane, vacuole | 37.9 | 46.11 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 47.49 | 45.41 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 43.84 | 45.28 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 40.18 | 44.22 |
| GSMUA_Achr10P... | Banana | plasma membrane | 51.6 | 43.13 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 38.36 | 40.78 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 41.1 | 40.72 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 38.36 | 40.58 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 40.64 | 39.73 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 35.62 | 38.24 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 41.1 | 37.97 |
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 35.62 | 37.14 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 41.55 | 33.83 |
Protein Annotations
| MapMan:24.2.12.3 | EntrezGene:822112 | UniProt:A0A178VAT5 | ProteinID:AEE76991.1 | EMBL:AF375396 | ArrayExpress:AT3G25190 |
| EnsemblPlantsGene:AT3G25190 | RefSeq:AT3G25190 | TAIR:AT3G25190 | RefSeq:AT3G25190-TAIR-G | EnsemblPlants:AT3G25190.1 | TAIR:AT3G25190.1 |
| EMBL:AY066047 | ProteinID:BAB02079.1 | InterPro:Ccc1_fam | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005381 |
| GO:GO:0005384 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006880 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010039 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 |
| GO:GO:0030026 | GO:GO:0034755 | GO:GO:0055072 | GO:GO:0071281 | GO:GO:0071369 | GO:GO:0071421 |
| GO:GO:0071732 | RefSeq:NP_189156.1 | ProteinID:OAP02072.1 | PFAM:PF01988 | PO:PO:0000037 | PO:PO:0007611 |
| PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009046 | PO:PO:0020100 | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF6 |
| UniProt:Q9LSF6 | TMHMM:TMhelix | UniParc:UPI000009FA49 | SEG:seg | : | : |
Description
Vacuolar iron transporter homolog 2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSF6]
Coordinates
chr3:+:9174398..9175866
Molecular Weight (calculated)
23212.6 Da
IEP (calculated)
8.748
GRAVY (calculated)
0.335
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSNVQLSET NSPRNQKTRP RAEKEEVDYM QRAQWLRAAL LGANDGLVTV ASLMMGVGSI KEDVKAMLLV GFAGLVAGAC SMAIGEFVSV CTQRDIETAQ
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
101: MKRAIEHKTS LSAIDEQEEE EKKERLPNPG QAAIASALAF SVGAAMPLLG AVFIENHKVR MVVVAVVATI ALVVFGVTGA VLGKTSVVKS SVRVVIGGWM
201: AMALTFGLTK FIGSAAMQI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.