Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42211 | Soybean | cytosol, plasma membrane, vacuole | 67.78 | 58.1 |
| KRH58338 | Soybean | cytosol, peroxisome, plasma membrane | 51.67 | 47.45 |
| KRH42213 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 56.67 | 46.15 |
| KRH42212 | Soybean | plasma membrane | 56.11 | 43.91 |
| KRH58337 | Soybean | plasma membrane | 55.56 | 43.67 |
| KRH28884 | Soybean | cytosol, peroxisome, vacuole | 55.56 | 43.48 |
| Solyc01g104800.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 49.44 | 43.41 |
| PGSC0003DMT400076567 | Potato | plasma membrane | 50.56 | 43.33 |
| KRH35158 | Soybean | plasma membrane | 46.11 | 41.92 |
| PGSC0003DMT400032701 | Potato | plasma membrane | 49.44 | 41.78 |
| KRH76566 | Soybean | cytosol, peroxisome, vacuole | 53.89 | 41.63 |
| VIT_12s0055g00870.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 51.67 | 41.52 |
| Solyc01g104810.2.1 | Tomato | plasma membrane | 49.44 | 41.4 |
| PGSC0003DMT400076565 | Potato | plasma membrane | 48.89 | 40.93 |
| KRG91640 | Soybean | cytosol, peroxisome, vacuole | 49.44 | 40.64 |
| VIT_12s0055g00850.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 46.67 | 39.81 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 45.0 | 39.71 |
| Solyc01g104820.2.1 | Tomato | plasma membrane | 47.78 | 39.63 |
| VIT_12s0055g00860.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 48.89 | 39.46 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 47.22 | 39.17 |
| PGSC0003DMT400076561 | Potato | cytosol, peroxisome, plasma membrane | 47.22 | 38.99 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 47.22 | 38.81 |
| KRH58339 | Soybean | cytosol, peroxisome, plasma membrane | 47.78 | 38.56 |
| KRH42215 | Soybean | cytosol, plastid, vacuole | 48.33 | 37.99 |
| AT3G25190.1 | Thale cress | cytosol, peroxisome, plastid | 46.11 | 37.9 |
| PGSC0003DMT400076566 | Potato | extracellular, plasma membrane, vacuole | 33.89 | 37.89 |
| Bra013226.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 45.56 | 37.44 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 45.56 | 37.44 |
| KRH08706 | Soybean | cytosol, peroxisome, vacuole | 48.33 | 37.34 |
| KRH42214 | Soybean | extracellular | 33.89 | 36.97 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 38.33 | 35.94 |
| Solyc01g105260.1.1 | Tomato | extracellular, vacuole | 31.67 | 35.85 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 41.11 | 35.75 |
| KRH58340 | Soybean | plasma membrane | 46.67 | 35.59 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 41.11 | 35.58 |
| KRH70313 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 47.22 | 35.56 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 35.56 | 35.16 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 41.67 | 35.05 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 40.56 | 34.76 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 40.56 | 34.76 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 40.56 | 34.76 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 40.56 | 34.76 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 39.44 | 34.47 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 40.56 | 34.43 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 39.44 | 33.81 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 39.44 | 33.81 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 39.44 | 33.49 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 36.67 | 33.17 |
| KRH10486 | Soybean | plasma membrane | 33.89 | 32.97 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 41.67 | 32.75 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 37.78 | 32.08 |
| PGSC0003DMT400076558 | Potato | cytosol, peroxisome, plasma membrane | 36.67 | 32.04 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 36.11 | 31.4 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 37.78 | 30.77 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 38.89 | 30.57 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 21.11 | 30.4 |
| Solyc01g104830.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 34.44 | 30.39 |
| GSMUA_Achr10P... | Banana | plasma membrane | 43.89 | 30.15 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 37.22 | 29.91 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 38.33 | 29.11 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 37.78 | 25.28 |
Protein Annotations
| EMBL:ACUP02003252 | EnsemblPlants:KRH58336 | EnsemblPlantsGene:GLYMA_05G121200 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF6 | PFAM:PF01988 | ProteinID:KRH58336 | ProteinID:KRH58336.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0006ED8570 | UniProt:A0A0R0JU55 | MapMan:24.2.12.3 | : |
Description
hypothetical protein
Coordinates
chr5:-:31407296..31407960
Molecular Weight (calculated)
19529.4 Da
IEP (calculated)
5.133
GRAVY (calculated)
0.829
Length
180 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFLGTSSNE MPIGHIEILI HSNDIEAKRS QDIAENNIDY SQRAQWLREA VFGAKNGLVL INLLMVGVEA LNEDIIIMLL AGFAGLVVGA CSMAIEEFVY
101: TQLVRHGASA IGFSIGAVVS MLAAVFVWDY KIRLLVFAVP ILALLVFGGV GIVLGKMLIG GWMTMAITFG FDKFIGYTRL
101: TQLVRHGASA IGFSIGAVVS MLAAVFVWDY KIRLLVFAVP ILALLVFGGV GIVLGKMLIG GWMTMAITFG FDKFIGYTRL
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [cytosol,peroxisome,vacuole]
SUBAcon: [cytosol,peroxisome,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.