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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU2Hr1G081800.3
HORVU5Hr1G071910.1
HORVU7Hr1G000910.1
HORVU7Hr1G048940.3

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G25190.1 HORVU7Hr1G000910.1 AT1G01010.1 21798944
AT3G25190.1 HORVU2Hr1G081800.3 AT4G26455.1 21798944
AT3G25190.1 HORVU5Hr1G071910.1 AT4G26455.1 21798944
AT3G25190.1 HORVU7Hr1G048940.3 AT4G26455.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G434100.1 Wheat cytosol, plasma membrane, vacuole 52.84 96.8
TraesCS2D01G431900.1 Wheat cytosol, plasma membrane, vacuole 79.04 86.19
TraesCS2A01G433900.1 Wheat cytosol, plasma membrane, vacuole 79.04 86.19
TraesCS2A01G434000.1 Wheat cytosol, plasma membrane, vacuole 79.04 86.19
TraesCS2B01G455200.1 Wheat cytosol, plasma membrane, vacuole 79.04 86.19
TraesCS2B01G455100.1 Wheat cytosol, plasma membrane, vacuole 79.04 86.19
TraesCS2A01G434200.1 Wheat cytosol, plasma membrane, vacuole 79.04 86.19
TraesCS2D01G432000.1 Wheat cytosol, plasma membrane, vacuole 79.04 85.38
TraesCS2B01G455300.1 Wheat cytosol, plasma membrane, vacuole 78.6 84.91
TraesCS2B01G455000.1 Wheat cytosol, plasma membrane, vacuole 65.94 82.97
Os04t0686800-01 Rice cytosol, peroxisome, vacuole 65.07 71.63
Zm00001d026679_P001 Maize cytosol, peroxisome, vacuole 64.19 71.01
Zm00001d002884_P001 Maize cytosol, plasma membrane, vacuole 64.63 69.16
EES11692 Sorghum cytosol, peroxisome, vacuole 65.5 65.5
GSMUA_Achr9P29610_001 Banana cytosol, peroxisome, vacuole 54.15 60.78
CDX88318 Canola cytosol, peroxisome, vacuole 49.34 58.25
Bra015718.1-P Field mustard cytosol, peroxisome, vacuole 49.34 58.25
CDX87566 Canola cytosol, peroxisome, vacuole 48.91 57.73
Bra008277.1-P Field mustard cytosol, peroxisome, vacuole 48.91 57.73
CDY45946 Canola cytosol, peroxisome, vacuole 48.91 57.73
Bra012271.1-P Field mustard cytosol, peroxisome, vacuole 50.22 57.5
CDY71883 Canola cytosol, peroxisome, vacuole 50.22 57.5
CDY20388 Canola cytosol, peroxisome, vacuole 48.47 57.22
AT1G76800.1 Thale cress cytosol, peroxisome, plasma membrane 48.03 56.12
AT1G21140.1 Thale cress cytosol, peroxisome, plasma membrane 48.47 55.5
CDY33672 Canola cytosol, peroxisome, vacuole 47.16 55.38
AT3G43630.1 Thale cress cytosol, peroxisome, plasma membrane 48.03 55.0
CDY01332 Canola cytosol, peroxisome, vacuole 50.22 54.76
AT3G43660.1 Thale cress cytosol, peroxisome, vacuole 47.16 54.55
KRH35158 Soybean plasma membrane 47.16 54.55
CDY29473 Canola cytosol, peroxisome, vacuole 47.6 54.23
CDY04601 Canola cytosol, peroxisome, vacuole 47.6 54.23
Bra025879.1-P Field mustard cytosol, peroxisome, vacuole 47.6 54.23
CDX96601 Canola cytosol, peroxisome, vacuole 46.72 53.5
Solyc04g051180.1.1 Tomato extracellular 38.43 53.33
Bra016431.1-P Field mustard cytosol 25.33 52.73
PGSC0003DMT400076566 Potato extracellular, plasma membrane, vacuole 35.81 50.93
KRG91640 Soybean cytosol, peroxisome, vacuole 48.03 50.23
VIT_18s0076g00320.t01 Wine grape cytosol, peroxisome, vacuole 48.47 50.23
Solyc01g104800.2.1 Tomato cytosol, peroxisome, plasma membrane 44.54 49.76
KRH42213 Soybean cytosol, endoplasmic reticulum, plasma membrane 47.16 48.87
CDY15107 Canola cytosol, peroxisome, plasma membrane 46.72 48.86
Solyc01g104810.2.1 Tomato plasma membrane 45.85 48.84
PGSC0003DMT400032701 Potato plasma membrane 45.41 48.83
VIT_12s0055g00870.t01 Wine grape cytosol, peroxisome, plasma membrane 47.6 48.66
PGSC0003DMT400076567 Potato plasma membrane 44.54 48.57
KRH58338 Soybean cytosol, peroxisome, plasma membrane 41.48 48.47
VIT_12s0055g00860.t01 Wine grape cytosol, peroxisome, plasma membrane 47.16 48.43
PGSC0003DMT400076565 Potato plasma membrane 45.41 48.37
KRH08706 Soybean cytosol, peroxisome, vacuole 48.91 48.07
PGSC0003DMT400008929 Potato cytosol, peroxisome, vacuole 47.6 48.02
CDY52279 Canola cytosol, peroxisome, plasma membrane 45.41 47.49
Bra013226.1-P Field mustard cytosol, peroxisome, plasma membrane 45.41 47.49
AT3G25190.1 Thale cress cytosol, peroxisome, plastid 45.41 47.49
Solyc01g104820.2.1 Tomato plasma membrane 44.98 47.47
KRH43941 Soybean cytosol, peroxisome, vacuole 44.98 47.47
KRH28884 Soybean cytosol, peroxisome, vacuole 47.6 47.39
KRH42214 Soybean extracellular 34.06 47.27
KRH58337 Soybean plasma membrane 47.16 47.16
PGSC0003DMT400076561 Potato cytosol, peroxisome, plasma membrane 44.54 46.79
KRH42215 Soybean cytosol, plastid, vacuole 46.72 46.72
KRH42212 Soybean plasma membrane 46.72 46.52
KRH70313 Soybean cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 48.03 46.03
KRH76566 Soybean cytosol, peroxisome, vacuole 46.72 45.92
GSMUA_Achr10P... Banana plasma membrane 52.4 45.8
Solyc01g104780.2.1 Tomato nucleus, peroxisome, vacuole 42.36 45.75
HORVU4Hr1G020210.1 Barley cytosol, peroxisome 44.54 45.54
PGSC0003DMT400076498 Potato plasma membrane 42.36 44.7
Solyc01g105260.1.1 Tomato extracellular, vacuole 31.0 44.65
KRH58339 Soybean cytosol, peroxisome, plasma membrane 43.23 44.39
VIT_12s0055g00850.t01 Wine grape cytosol, peroxisome, plasma membrane 40.61 44.08
KRH58340 Soybean plasma membrane 44.54 43.22
KRH10486 Soybean plasma membrane 34.06 42.16
HORVU6Hr1G061000.1 Barley extracellular 44.98 39.31
KRH58336 Soybean peroxisome, plasma membrane, vacuole 30.57 38.89
PGSC0003DMT400076558 Potato cytosol, peroxisome, plasma membrane 32.31 35.92
Solyc01g104830.2.1 Tomato cytosol, peroxisome, plasma membrane 30.13 33.82
KRH42211 Soybean cytosol, plasma membrane, vacuole 29.69 32.38
Protein Annotations
EnsemblPlants:HORVU2Hr1G101180.2EnsemblPlantsGene:HORVU2Hr1G101180InterPro:Ccc1_famncoils:CoilPANTHER:PTHR31851PANTHER:PTHR31851:SF30
PFAM:PF01988SEG:segTMHMM:TMhelixMapMan:24.2.12.3::
Description
No Description!
Coordinates
chrchr2H:-:693330846..693331535
Molecular Weight (calculated)
19371.5 Da
IEP (calculated)
7.909
GRAVY (calculated)
0.568
Length
229 amino acids
Sequence
(BLAST)
001: PTGGSPGARX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXDDSESSI DFAGRANWLR AAVLGANDGL VSTASLMLGV SAVKPEARAM VVSGFAGLLA
101: GACSMAIGEY VSVCSQRDVE IAQLDQAGKR GGDEEKELPS PAQAAAASAL AFSVGALLPL LAAGFIAGYN VRVAVVVVVA TLALAAFGCV GAVLGRAPVA
201: RSCARVVVGG LAAMAVTFGF MRLFRASGV
Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [cytosol,peroxisome,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.