Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025879.1-P | Field mustard | cytosol, peroxisome, vacuole | 100.0 | 100.0 |
| CDY29473 | Canola | cytosol, peroxisome, vacuole | 100.0 | 100.0 |
| CDY71883 | Canola | cytosol, peroxisome, vacuole | 90.05 | 90.5 |
| AT1G21140.1 | Thale cress | cytosol, peroxisome, plasma membrane | 86.07 | 86.5 |
| CDY01332 | Canola | cytosol, peroxisome, vacuole | 90.05 | 86.19 |
| CDY33672 | Canola | cytosol, peroxisome, vacuole | 82.59 | 85.13 |
| CDX96601 | Canola | cytosol, peroxisome, vacuole | 84.08 | 84.5 |
| CDY45946 | Canola | cytosol, peroxisome, vacuole | 74.63 | 77.32 |
| CDY20388 | Canola | cytosol, peroxisome, vacuole | 74.63 | 77.32 |
| CDX88318 | Canola | cytosol, peroxisome, vacuole | 74.13 | 76.8 |
| CDX87566 | Canola | cytosol, peroxisome, vacuole | 74.13 | 76.8 |
| Solyc01g104780.2.1 | Tomato | nucleus, peroxisome, vacuole | 67.66 | 64.15 |
| KRH43941 | Soybean | cytosol, peroxisome, vacuole | 69.15 | 64.06 |
| PGSC0003DMT400076498 | Potato | plasma membrane | 67.66 | 62.67 |
| GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 61.19 | 60.29 |
| TraesCS2D01G588000.1 | Wheat | cytosol, plasma membrane, vacuole | 56.72 | 59.38 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 58.71 | 57.28 |
| CDY15107 | Canola | cytosol, peroxisome, plasma membrane | 62.19 | 57.08 |
| CDY52279 | Canola | cytosol, peroxisome, plasma membrane | 61.19 | 56.16 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 57.71 | 56.04 |
| Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 57.21 | 55.29 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 58.71 | 55.14 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 33.83 | 54.4 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 55.72 | 53.33 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 55.72 | 53.33 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 55.72 | 53.33 |
| TraesCS2D01G431900.1 | Wheat | cytosol, plasma membrane, vacuole | 55.22 | 52.86 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 47.76 | 52.75 |
| KRH10486 | Soybean | plasma membrane | 48.26 | 52.43 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 55.22 | 52.36 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 54.23 | 51.9 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 54.23 | 51.9 |
| TraesCS2D01G432000.1 | Wheat | cytosol, plasma membrane, vacuole | 54.73 | 51.89 |
| EES11692 | Sorghum | cytosol, peroxisome, vacuole | 58.21 | 51.09 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 52.74 | 50.0 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 48.26 | 48.74 |
| HORVU2Hr1G101180.2 | Barley | cytosol | 54.23 | 47.6 |
| GSMUA_Achr10P... | Banana | plasma membrane | 61.19 | 46.95 |
| TraesCS4D01G110600.1 | Wheat | cytosol, plasma membrane, vacuole | 48.26 | 43.89 |
| Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 44.28 | 43.0 |
| HORVU4Hr1G020210.1 | Barley | cytosol, peroxisome | 47.76 | 42.86 |
| OQU82931 | Sorghum | cytosol, peroxisome, plastid, vacuole | 49.75 | 42.19 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 48.76 | 36.43 |
Protein Annotations
| EnsemblPlants:CDY04601 | EnsemblPlantsGene:GSBRNA2T00119157001 | GO:A0A078GXZ7 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF30 |
| PFAM:PF01988 | ProteinID:CDY04601 | ProteinID:CDY04601.1 | ProteinID:CDY29473.1 | TMHMM:TMhelix | UniParc:UPI000253F05D |
| UniProt:A0A078GXZ7 | MapMan:24.2.12.3 | : | : | : | : |
Description
BnaC05g16390DBnaA06g14970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXZ7]
Coordinates
chrLK031956:+:220239..222050
Molecular Weight (calculated)
21025.0 Da
IEP (calculated)
9.828
GRAVY (calculated)
0.511
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MESHNVNNSL NIDMEKDQEK AFDYSKRAQW LRAAVLGAND GLVTTASLMM GVGAIKPDVK TMVLTGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKRDN
101: GGVIDKEKLP SPIKAATASA LAFSIGAIVP LLAAAFVKTY KVRIGVIVAA VTLALVMFGW LGAVLGKAPV VKSSARVLIG GWLAMAVTYG LTKLVGSHGM
201: S
101: GGVIDKEKLP SPIKAATASA LAFSIGAIVP LLAAAFVKTY KVRIGVIVAA VTLALVMFGW LGAVLGKAPV VKSSARVLIG GWLAMAVTYG LTKLVGSHGM
201: S
001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
Arabidopsis Description
Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.