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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol

Predictor Summary:
  • nucleus 1
  • golgi 3
  • cytosol 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana extracellular, vacuole 65.62 45.65
GSMUA_Achr11P... Banana extracellular, plasma membrane, vacuole 57.03 43.45
GSMUA_Achr5P19910_001 Banana mitochondrion 62.5 42.11
Zm00001d017402_P001 Maize cytosol, plasma membrane, plastid 74.22 40.77
TraesCS6D01G221100.1 Wheat cytosol, peroxisome, vacuole 72.66 40.26
TraesCS6B01G285700.1 Wheat cytosol, peroxisome, vacuole 71.88 39.83
TraesCS6A01G238800.1 Wheat cytosol 70.31 38.79
HORVU6Hr1G061000.1 Barley extracellular 75.0 36.64
EES05823 Sorghum plastid 66.41 36.32
GSMUA_Achr1P20190_001 Banana plastid 60.94 33.33
Os04t0538400-01 Rice mitochondrion, nucleus, plastid 63.28 32.79
Os04t0686800-01 Rice cytosol, peroxisome, vacuole 49.22 30.29
OQU85755 Sorghum cytosol, mitochondrion, plasma membrane, plastid 42.97 28.35
OQU85754 Sorghum plastid 67.97 28.16
Os11t0161900-00 Rice cytosol, nucleus, plasma membrane 42.19 26.09
Protein Annotations
EnsemblPlants:Os02t0644200-01EnsemblPlantsGene:Os02g0644200GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:Ccc1_fam
PANTHER:PTHR31851PANTHER:PTHR31851:SF32PFAM:PF01988ProteinID:BAS80011.1SEG:segTMHMM:TMhelix
UniParc:UPI0000DF07D2UniProt:A0A0P0VMB3MapMan:24.2.12.3:::
Description
Protein of unknown function DUF125, transmembrane family protein. (Os02t0644200-01)
Coordinates
chr2:-:25909942..25910552
Molecular Weight (calculated)
12716.4 Da
IEP (calculated)
5.005
GRAVY (calculated)
0.620
Length
128 amino acids
Sequence
(BLAST)
001: AIGEFVSVYA QCDIQAAQIE RARGGKDADG GEEEEELPSP TMAAVASALS FAAGAALPLL AGGFVRPWAA RVAAVCAASS LGLAGFGVAS AYLGGAGVAR
101: SGVRMLVGGW LAMAVTYGVL KLFGMHGV
Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.