Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 3
- cytosol 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr11P... | Banana | extracellular, vacuole | 65.62 | 45.65 |
GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 57.03 | 43.45 |
GSMUA_Achr5P19910_001 | Banana | mitochondrion | 62.5 | 42.11 |
Zm00001d017402_P001 | Maize | cytosol, plasma membrane, plastid | 74.22 | 40.77 |
TraesCS6D01G221100.1 | Wheat | cytosol, peroxisome, vacuole | 72.66 | 40.26 |
TraesCS6B01G285700.1 | Wheat | cytosol, peroxisome, vacuole | 71.88 | 39.83 |
TraesCS6A01G238800.1 | Wheat | cytosol | 70.31 | 38.79 |
HORVU6Hr1G061000.1 | Barley | extracellular | 75.0 | 36.64 |
EES05823 | Sorghum | plastid | 66.41 | 36.32 |
GSMUA_Achr1P20190_001 | Banana | plastid | 60.94 | 33.33 |
Os04t0538400-01 | Rice | mitochondrion, nucleus, plastid | 63.28 | 32.79 |
Os04t0686800-01 | Rice | cytosol, peroxisome, vacuole | 49.22 | 30.29 |
OQU85755 | Sorghum | cytosol, mitochondrion, plasma membrane, plastid | 42.97 | 28.35 |
OQU85754 | Sorghum | plastid | 67.97 | 28.16 |
Os11t0161900-00 | Rice | cytosol, nucleus, plasma membrane | 42.19 | 26.09 |
Protein Annotations
EnsemblPlants:Os02t0644200-01 | EnsemblPlantsGene:Os02g0644200 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Ccc1_fam |
PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 | ProteinID:BAS80011.1 | SEG:seg | TMHMM:TMhelix |
UniParc:UPI0000DF07D2 | UniProt:A0A0P0VMB3 | MapMan:24.2.12.3 | : | : | : |
Description
Protein of unknown function DUF125, transmembrane family protein. (Os02t0644200-01)
Coordinates
chr2:-:25909942..25910552
Molecular Weight (calculated)
12716.4 Da
IEP (calculated)
5.005
GRAVY (calculated)
0.620
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: AIGEFVSVYA QCDIQAAQIE RARGGKDADG GEEEEELPSP TMAAVASALS FAAGAALPLL AGGFVRPWAA RVAAVCAASS LGLAGFGVAS AYLGGAGVAR
101: SGVRMLVGGW LAMAVTYGVL KLFGMHGV
101: SGVRMLVGGW LAMAVTYGVL KLFGMHGV
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.