Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 5
- extracellular 2
- endoplasmic reticulum 2
- vacuole 4
- golgi 3
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr11P... | Banana | extracellular, vacuole | 78.95 | 81.52 |
GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 71.58 | 80.95 |
Os02t0644200-01 | Rice | cytosol, peroxisome | 42.11 | 62.5 |
EES05823 | Sorghum | plastid | 68.95 | 55.98 |
Zm00001d017402_P001 | Maize | cytosol, plasma membrane, plastid | 68.42 | 55.79 |
GSMUA_Achr1P20190_001 | Banana | plastid | 67.37 | 54.7 |
TraesCS2D01G384100.1 | Wheat | cytosol, peroxisome, vacuole | 66.32 | 54.55 |
TraesCS2D01G383900.1 | Wheat | cytosol, peroxisome, vacuole | 65.79 | 54.11 |
TraesCS2A01G387100.1 | Wheat | cytosol, peroxisome, vacuole | 66.32 | 53.39 |
TraesCS6D01G221100.1 | Wheat | cytosol, peroxisome, vacuole | 64.74 | 53.25 |
TraesCS6B01G285700.1 | Wheat | cytosol, peroxisome, vacuole | 64.74 | 53.25 |
Zm00001d002820_P001 | Maize | plastid | 67.89 | 52.65 |
TraesCS2B01G404700.1 | Wheat | cytosol, peroxisome, vacuole | 65.26 | 52.54 |
GSMUA_Achr9P29610_001 | Banana | cytosol, peroxisome, vacuole | 56.32 | 52.45 |
EES12569 | Sorghum | cytosol | 70.0 | 52.36 |
TraesCS6A01G238800.1 | Wheat | cytosol | 63.68 | 52.16 |
Os04t0538400-01 | Rice | mitochondrion, nucleus, plastid | 67.37 | 51.82 |
Zm00001d025949_P001 | Maize | vacuole | 65.79 | 48.64 |
OQU85755 | Sorghum | cytosol, mitochondrion, plasma membrane, plastid | 48.95 | 47.94 |
HORVU6Hr1G061000.1 | Barley | extracellular | 65.26 | 47.33 |
GSMUA_Achr10P... | Banana | plasma membrane | 57.37 | 41.6 |
OQU85754 | Sorghum | plastid | 67.37 | 41.42 |
Protein Annotations
EnsemblPlants:GSMUA_Achr5P19910_001 | EnsemblPlants:GSMUA_Achr5T19910_001 | EnsemblPlantsGene:GSMUA_Achr5G19910_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 | SEG:seg | TMHMM:TMhelix |
UniParc:UPI0002969C41 | UniProt:M0T020 | MapMan:24.2.12.3 | : | : | : |
Description
integral membrane protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G19910_001]
Coordinates
chr5:-:21539550..21540122
Molecular Weight (calculated)
19213.7 Da
IEP (calculated)
8.503
GRAVY (calculated)
0.727
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MARTQWLRAA VLGSNDGLVS IASLMIGVGA VNQSAKAMLV SGLAGLVAGA CSMAIGEFVS VHAQYDIEVA EMERRRRGSG SGSEEGVRGE ESLPSPMLAA
101: GASALAFALG AVLPLLAGGF IRSWSVRVGA VCAVSSLGLA GFGAAGAVLG GADIWKPALR VLGGGWLAML VTYCVLRIFG LLFNMQVSSA
101: GASALAFALG AVLPLLAGGF IRSWSVRVGA VCAVSSLGLA GFGAAGAVLG GADIWKPALR VLGGGWLAML VTYCVLRIFG LLFNMQVSSA
001: MESHNVSNSL NLDMEMDQEK AFDYSKRAQW LRAAVLGAND GLVSTASLMM GVGAVKQDVK VMILSGFAGL VAGACSMAIG EFVSVYSQYD IEVAQMKREN
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
101: GGQVEKEKLP SPMQAAAASA LAFSLGAIVP LMAAAFVKDY HVRIGAIVAA VTLALVMFGW LGAVLGKAPV FKSSARVLIG GWLAMAVTFG LTKLIGTHSL
Arabidopsis Description
Vacuolar iron transporter homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPU9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.