Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002820_P001 | Maize | plastid | 85.6 | 89.8 |
| EES12569 | Sorghum | cytosol | 87.55 | 88.58 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 45.91 | 70.24 |
| TraesCS2D01G383900.1 | Wheat | cytosol, peroxisome, vacuole | 62.26 | 69.26 |
| TraesCS2A01G387100.1 | Wheat | cytosol, peroxisome, vacuole | 63.42 | 69.07 |
| TraesCS2D01G384100.1 | Wheat | cytosol, peroxisome, vacuole | 61.87 | 68.83 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 48.25 | 67.39 |
| TraesCS2B01G404700.1 | Wheat | cytosol, peroxisome, vacuole | 61.48 | 66.95 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 48.64 | 65.79 |
| Zm00001d017402_P001 | Maize | cytosol, plasma membrane, plastid | 58.75 | 64.81 |
| Os04t0538400-01 | Rice | mitochondrion, nucleus, plastid | 57.2 | 59.51 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 53.31 | 58.55 |
| Zm00001d026679_P001 | Maize | cytosol, peroxisome, vacuole | 40.86 | 50.72 |
| Zm00001d002884_P001 | Maize | cytosol, plasma membrane, vacuole | 41.63 | 50.0 |
Protein Annotations
| EnsemblPlants:Zm00001d025949_P001 | EnsemblPlants:Zm00001d025949_T001 | EnsemblPlantsGene:Zm00001d025949 | EntrezGene:103641884 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 | ProteinID:AQK45089.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000221117B | UniProt:K7TR42 | MapMan:24.2.12.3 | : |
Description
Vacuolar iron transporter homolog 1
Coordinates
chr10:-:134548390..134549163
Molecular Weight (calculated)
25737.9 Da
IEP (calculated)
4.646
GRAVY (calculated)
0.535
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLHLSSHVH AAAAAQATAS AFPNGKKAES TDVLPPRAVV TIDVEAGAPT NAAGDDPRDA DGDAGGVDYM ARAQWLRAAV LGANDGLVSV ASLMIGVGAV
101: SATPKAMLVS GTAGLVAGAC SMAIGEFVSV YAQYDMEVSQ IKRGDGGEEE EEGAARDGLP SPTQAALASA LAFAFGALLP LLAGVFVPSW AARVAAVCAA
201: TSVGLAAFGV AGAYLGGASM LRSGLRVLLG GWFAMLLTFA VLRLFGTVFH IQVSSSV
101: SATPKAMLVS GTAGLVAGAC SMAIGEFVSV YAQYDMEVSQ IKRGDGGEEE EEGAARDGLP SPTQAALASA LAFAFGALLP LLAGVFVPSW AARVAAVCAA
201: TSVGLAAFGV AGAYLGGASM LRSGLRVLLG GWFAMLLTFA VLRLFGTVFH IQVSSSV
001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL
Arabidopsis Description
Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]
SUBAcon: [peroxisome,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.