Factsheet for Zm00001d002820_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	peroxisome

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12569	Sorghum	cytosol	94.29	90.94
Zm00001d025949_P001	Maize	vacuole	89.8	85.6
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	50.2	73.21
GSMUA_Achr11P...	Banana	extracellular, vacuole	53.06	70.65
TraesCS2D01G383900.1	Wheat	cytosol, peroxisome, vacuole	66.12	70.13
TraesCS2D01G384100.1	Wheat	cytosol, peroxisome, vacuole	65.71	69.7
TraesCS2A01G387100.1	Wheat	cytosol, peroxisome, vacuole	66.94	69.49
GSMUA_Achr5P19910_001	Banana	mitochondrion	52.65	67.89
TraesCS2B01G404700.1	Wheat	cytosol, peroxisome, vacuole	65.31	67.8
Zm00001d017402_P001	Maize	cytosol, plasma membrane, plastid	62.04	65.24
Os04t0538400-01	Rice	mitochondrion, nucleus, plastid	60.82	60.32
GSMUA_Achr1P20190_001	Banana	plastid	57.14	59.83
Zm00001d026679_P001	Maize	cytosol, peroxisome, vacuole	43.27	51.21
Zm00001d002884_P001	Maize	cytosol, plasma membrane, vacuole	43.67	50.0

Protein Annotations

EMBL:BT066146	EnsemblPlants:Zm00001d002820_P001	EnsemblPlants:Zm00001d002820_T001	EnsemblPlantsGene:Zm00001d002820	EntrezGene:100383083	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:Ccc1_fam	PANTHER:PTHR31851	PANTHER:PTHR31851:SF32	PFAM:PF01988
ProteinID:ONM15443.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000160B76E	UniProt:C0PCX7	MapMan:24.2.12.3

Description

Vacuolar iron transporter homolog 1

Coordinates

chr2:+:23582231..23582968

Molecular Weight (calculated)

24694.8 Da

IEP (calculated)

4.909

GRAVY (calculated)

0.576

Length

245 amino acids

Sequence
(BLAST)

001: MDPHLSSHVH AAAAAASAFP DGKKLESDVL PPGVVTLDVE AGAPTNAAGA DPRDGDDGDA GFDYMARAQW LRAAVLGAND GLVSVASLMI GIGAVNATRK
101: AMLVSGMAGL VAGACSMAIG EFVSVYAQYD IEVSQIKRDG EEAARDSLPS PTQAAIASAL AFAFGALLPL LAGVFVPSWA ARVAAVCAAT SVGLAGFGVA
201: GAYLGGANML RSGLRVLLGG WFAMLVTFGV LRLFGTVFHI QVSSA

Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)

001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL

Arabidopsis Description

Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.