Subcellular Localization
min:
: max
Winner_takes_all: cytosol, peroxisome, vacuole
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G383900.1 | Wheat | cytosol, peroxisome, vacuole | 94.92 | 96.97 |
| TraesCS2B01G404700.1 | Wheat | cytosol, peroxisome, vacuole | 93.64 | 93.64 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 50.0 | 70.24 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 53.39 | 68.48 |
| Zm00001d002820_P001 | Maize | plastid | 69.49 | 66.94 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 53.39 | 66.32 |
| EES12569 | Sorghum | cytosol | 71.19 | 66.14 |
| Zm00001d025949_P001 | Maize | vacuole | 69.07 | 63.42 |
| TraesCS6A01G238800.1 | Wheat | cytosol | 60.59 | 61.64 |
| Os04t0538400-01 | Rice | mitochondrion, nucleus, plastid | 63.14 | 60.32 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 58.47 | 58.97 |
| TraesCS2A01G434100.1 | Wheat | cytosol, plasma membrane, vacuole | 26.27 | 49.6 |
| TraesCS2A01G433900.1 | Wheat | cytosol, plasma membrane, vacuole | 43.64 | 49.05 |
| TraesCS2A01G434000.1 | Wheat | cytosol, plasma membrane, vacuole | 43.64 | 49.05 |
| TraesCS2A01G434200.1 | Wheat | cytosol, plasma membrane, vacuole | 43.64 | 49.05 |
| TraesCS4A01G209600.1 | Wheat | plasma membrane | 40.25 | 47.74 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G387100.1 | EnsemblPlantsGene:TraesCS2A01G387100 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.12.3 | : | : | : |
Description
No Description!
Coordinates
chr2A:-:632928464..632929174
Molecular Weight (calculated)
23766.7 Da
IEP (calculated)
6.350
GRAVY (calculated)
0.444
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHHVGSSHV HADGERRAKE EDVVVVLAVD AEAADPKPVE ADDRPGDGEG GVNYMARAQW LRAAVLGAND GLVSVASLMI GVSAVNDGGK TMLVSGLAGL
101: VAGACSMAIG EFVSVYAQYD IEVAQIKRDG AKGKKESLAS PTLAALASAL AFAVGALLPL LAGGFVRPYG ARVGAVCAAT TVGLAGFGAA GGYLGGASML
201: RSGSRVLLGG WVAMAVTYGV LWLFAKVSHI QVSSLG
101: VAGACSMAIG EFVSVYAQYD IEVAQIKRDG AKGKKESLAS PTLAALASAL AFAVGALLPL LAGGFVRPYG ARVGAVCAAT TVGLAGFGAA GGYLGGASML
201: RSGSRVLLGG WVAMAVTYGV LWLFAKVSHI QVSSLG
001: MESHNTLNLD MEKDQEKAFD YSKRAQWLRA AVLGANDGLV STASLMMGVG AVKQNVKIMI LTGFAGLVAG ACSMAIGEFV SVYSQYDIEV AQMKRETGGE
101: IEKEKLPSPT QAAAASALAF SLGAMVPLLA AAFVKEYKVR IGAIVAAVTL ALVMFGWLGA VLGKAPVVKS SLRVLVGGWL AMAITYGFTK LIGSHSHMYV
101: IEKEKLPSPT QAAAASALAF SLGAMVPLLA AAFVKEYKVR IGAIVAAVTL ALVMFGWLGA VLGKAPVVKS SLRVLVGGWL AMAITYGFTK LIGSHSHMYV
Arabidopsis Description
Vacuolar iron transporter homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C3]
SUBAcon: [cytosol,plasma membrane,peroxisome]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.