Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G384100.1 | Wheat | cytosol, peroxisome, vacuole | 93.22 | 95.24 |
| TraesCS2D01G383900.1 | Wheat | cytosol, peroxisome, vacuole | 92.8 | 94.81 |
| TraesCS2A01G387100.1 | Wheat | cytosol, peroxisome, vacuole | 93.64 | 93.64 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 50.42 | 70.83 |
| GSMUA_Achr11P... | Banana | extracellular, vacuole | 53.81 | 69.02 |
| TraesCS6B01G285700.1 | Wheat | cytosol, peroxisome, vacuole | 63.98 | 65.37 |
| Zm00001d002820_P001 | Maize | plastid | 67.8 | 65.31 |
| GSMUA_Achr5P19910_001 | Banana | mitochondrion | 52.54 | 65.26 |
| EES12569 | Sorghum | cytosol | 69.49 | 64.57 |
| Zm00001d025949_P001 | Maize | vacuole | 66.95 | 61.48 |
| GSMUA_Achr1P20190_001 | Banana | plastid | 59.75 | 60.26 |
| Os04t0538400-01 | Rice | mitochondrion, nucleus, plastid | 61.86 | 59.11 |
| TraesCS2B01G455200.1 | Wheat | cytosol, plasma membrane, vacuole | 44.49 | 50.0 |
| TraesCS2B01G610400.1 | Wheat | cytosol, plasma membrane, vacuole | 43.64 | 50.0 |
| TraesCS2B01G455100.1 | Wheat | cytosol, plasma membrane, vacuole | 44.49 | 50.0 |
| TraesCS2B01G455000.1 | Wheat | cytosol, plasma membrane, vacuole | 38.56 | 50.0 |
| TraesCS2B01G455300.1 | Wheat | cytosol, plasma membrane, vacuole | 44.07 | 49.06 |
| TraesCS2B01G454900.1 | Wheat | cytosol, plasma membrane, vacuole | 40.25 | 44.81 |
| TraesCS4B01G112900.1 | Wheat | endoplasmic reticulum | 40.68 | 35.69 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G404700.1 | EnsemblPlantsGene:TraesCS2B01G404700 | InterPro:Ccc1_fam | PANTHER:PTHR31851 | PANTHER:PTHR31851:SF32 | PFAM:PF01988 |
| SEG:seg | TMHMM:TMhelix | MapMan:24.2.12.3 | : | : | : |
Description
No Description!
Coordinates
chr2B:-:572678082..572678792
Molecular Weight (calculated)
23749.6 Da
IEP (calculated)
6.627
GRAVY (calculated)
0.431
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHHVSSSHV HADGERRAKE EDVVVVLAVD AEAADPKPAG ADDHPGDDEG GVNYMARAQW LRAAVLGAND GLVSVASLMI GVSAVNDAGK TMLVSGLAGL
101: VAGACSMAIG EFVSVYAQYD IEVAQIKRDG AKGKKESLPS PTLAALASAL AFAVGALLPL LAGGFVRPRG ARIGAVCAAT TVGLGGFGAA GGYLGGASVA
201: RSGFRVLVGG WVAMAVTYGV LWLFAKVSHI HVSSLG
101: VAGACSMAIG EFVSVYAQYD IEVAQIKRDG AKGKKESLPS PTLAALASAL AFAVGALLPL LAGGFVRPRG ARIGAVCAAT TVGLGGFGAA GGYLGGASVA
201: RSGFRVLVGG WVAMAVTYGV LWLFAKVSHI HVSSLG
001: MESHNTLNLD MEKDQEKAFD YSKRAQWLRA AVLGANDGLV STASLMMGVG AVKQNVKIMI LTGFAGLVAG ACSMAIGEFV SVYSQYDIEV AQMKRETGGE
101: IEKEKLPSPT QAAAASALAF SLGAMVPLLA AAFVKEYKVR IGAIVAAVTL ALVMFGWLGA VLGKAPVVKS SLRVLVGGWL AMAITYGFTK LIGSHSHMYV
101: IEKEKLPSPT QAAAASALAF SLGAMVPLLA AAFVKEYKVR IGAIVAAVTL ALVMFGWLGA VLGKAPVVKS SLRVLVGGWL AMAITYGFTK LIGSHSHMYV
Arabidopsis Description
Vacuolar iron transporter homolog 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C3]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.