Factsheet for GSMUA_Achr11P03640_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	85.87	94.05
GSMUA_Achr5P19910_001	Banana	mitochondrion	81.52	78.95
Os02t0644200-01	Rice	cytosol, peroxisome	45.65	65.62
TraesCS2D01G384100.1	Wheat	cytosol, peroxisome, vacuole	70.11	55.84
Zm00001d017402_P001	Maize	cytosol, plasma membrane, plastid	70.65	55.79
TraesCS2D01G383900.1	Wheat	cytosol, peroxisome, vacuole	69.02	54.98
GSMUA_Achr1P20190_001	Banana	plastid	69.02	54.27
GSMUA_Achr9P29610_001	Banana	cytosol, peroxisome, vacuole	59.78	53.92
TraesCS2B01G404700.1	Wheat	cytosol, peroxisome, vacuole	69.02	53.81
EES05823	Sorghum	plastid	67.93	53.42
TraesCS2A01G387100.1	Wheat	cytosol, peroxisome, vacuole	68.48	53.39
TraesCS6D01G221100.1	Wheat	cytosol, peroxisome, vacuole	66.85	53.25
Zm00001d002820_P001	Maize	plastid	70.65	53.06
TraesCS6B01G285700.1	Wheat	cytosol, peroxisome, vacuole	66.3	52.81
EES12569	Sorghum	cytosol	72.28	52.36
TraesCS6A01G238800.1	Wheat	cytosol	65.76	52.16
Os04t0538400-01	Rice	mitochondrion, nucleus, plastid	69.57	51.82
OQU85755	Sorghum	cytosol, mitochondrion, plasma membrane, plastid	52.72	50.0
Zm00001d025949_P001	Maize	vacuole	67.39	48.25
HORVU6Hr1G061000.1	Barley	extracellular	67.39	47.33
GSMUA_Achr10P...	Banana	plasma membrane	63.04	44.27
OQU85754	Sorghum	plastid	67.39	40.13

Protein Annotations

EnsemblPlants:GSMUA_Achr11P03640_001	EnsemblPlants:GSMUA_Achr11T03640_001	EnsemblPlantsGene:GSMUA_Achr11G03640_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Ccc1_fam	PANTHER:PTHR31851	PANTHER:PTHR31851:SF32	PFAM:PF01988	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002950AE7	UniProt:M0RP44	MapMan:24.2.12.3	:	:	:

Description

integral membrane protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G03640_001]

Coordinates

chr11:+:2621862..2622416

Molecular Weight (calculated)

18540.9 Da

IEP (calculated)

8.047

GRAVY (calculated)

0.861

Length

184 amino acids

Sequence
(BLAST)

001: MARAQWLRAV VLGANDGLVS VASLMVGVGA VGQSAKAMLV SGLAGLVAGA CSMAIGEFVS VYAQYDIEVA ERERRRQDCG SEEEGSLPNP LLAAVASALA
101: FSLGAVLPLL AGGFIRSWGV RVGAVCAVSS LGLAGFGAAG AVLGGANVPN SVLRLLFGGW LAMLVTYGVL RVFGIVFGMH VSSA

Best Arabidopsis Sequence Match ( AT3G43660.1 )
(BLAST)

001: MESNNNNLNL DMEKDQETTF DYSKRAQWLR AAVLGANDGL VSTASLMMGI GAVKQDVRIM LLTGFAGLVA GACSMAIGEF ISVYSQYDIE VAQMKRESGG
101: ETKKEKLPSP TQAAIASALA FTLGAIVPLL AAAFVKEYKV RIGVIVAAVT LALVMFGWLG AVLGKAPVVK SLVRVLIGGW LAMAITFGFT KLVGSHGL

Arabidopsis Description

Vacuolar iron transporter homolog 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2C0]
SUBAcon: [peroxisome,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.