Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00884 | Canola | cytosol, mitochondrion, plastid | 99.22 | 99.22 |
| Bra015157.1-P | Field mustard | plastid | 85.94 | 99.1 |
| AT2G04900.1 | Thale cress | plastid | 95.31 | 95.31 |
| KRH14784 | Soybean | cytosol | 50.0 | 82.05 |
| KRH73358 | Soybean | cytosol | 67.97 | 78.38 |
| Solyc07g047700.2.1 | Tomato | cytosol | 67.97 | 78.38 |
| GSMUA_Achr6P35050_001 | Banana | cytosol | 66.41 | 76.58 |
| TraesCS5D01G400500.1 | Wheat | endoplasmic reticulum, extracellular | 67.19 | 74.78 |
| TraesCS5A01G390700.1 | Wheat | endoplasmic reticulum, extracellular | 67.19 | 74.78 |
| GSMUA_Achr6P35060_001 | Banana | cytosol, extracellular, plastid | 63.28 | 70.43 |
| Os03t0751000-01 | Rice | extracellular, plastid | 65.62 | 70.0 |
| VIT_12s0059g01490.t01 | Wine grape | mitochondrion | 61.72 | 66.95 |
| VIT_12s0059g01530.t01 | Wine grape | cytosol, extracellular | 60.94 | 65.55 |
| OQU90981 | Sorghum | mitochondrion | 67.97 | 63.04 |
| PGSC0003DMT400015679 | Potato | mitochondrion | 69.53 | 62.24 |
| CDY05730 | Canola | extracellular | 34.38 | 59.46 |
| CDY05068 | Canola | extracellular | 34.38 | 59.46 |
| Zm00001d050535_P001 | Maize | cytosol | 53.12 | 57.14 |
| Zm00001d040070_P001 | Maize | extracellular, plastid | 50.78 | 55.56 |
| Zm00001d030155_P001 | Maize | cytosol | 47.66 | 25.0 |
| Zm00001d024394_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 50.0 | 19.88 |
Protein Annotations
| EnsemblPlants:CDY27860 | EnsemblPlantsGene:GSBRNA2T00038706001 | GO:A0A078GMP8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF423 | PANTHER:PTHR43461 | PFAM:PF04241 | ProteinID:CDY27860 | ProteinID:CDY27860.1 | TMHMM:TMhelix |
| UniParc:UPI0004EEA3B7 | UniProt:A0A078GMP8 | MapMan:35.2 | : | : | : |
Description
BnaA07g04500DBnaA07g04500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMP8]
Coordinates
chrLK032211:-:21099..22466
Molecular Weight (calculated)
13814.8 Da
IEP (calculated)
10.248
GRAVY (calculated)
0.269
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNCVRSNLR DLGGRRSMDP RIWHKVAAVS GMAALGLGTY GAHVFKPENP SYKQVWQTAS LYHLVHTAAL VSAPSTKYPS IFGGLLTAGI VAFSGTCYMV
101: ALREDRKFST LAPFGGFAFI AAWATLLF
101: ALREDRKFST LAPFGGFAFI AAWATLLF
001: MGNSVRSNLR DIRGRRSMDP RMWHKVAAIS GMAALGLGTY GAHVFKPENP SYKQVWQTAS LYHLVHTAAL VSAPSTKYPN IFGGLLTAGI VAFSGTCYMV
101: ALREDRKFST LAPFGGFAFI AAWATLLF
101: ALREDRKFST LAPFGGFAFI AAWATLLF
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SI36]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.