Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 3
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G400500.1 | Wheat | endoplasmic reticulum, extracellular | 80.83 | 84.35 |
| TraesCS5A01G390700.1 | Wheat | endoplasmic reticulum, extracellular | 80.83 | 84.35 |
| KRH14784 | Soybean | cytosol | 54.17 | 83.33 |
| GSMUA_Achr6P35050_001 | Banana | cytosol | 75.83 | 81.98 |
| KRH73358 | Soybean | cytosol | 74.17 | 80.18 |
| Solyc07g047700.2.1 | Tomato | cytosol | 72.5 | 78.38 |
| OQU90981 | Sorghum | mitochondrion | 87.5 | 76.09 |
| Bra015157.1-P | Field mustard | plastid | 70.0 | 75.68 |
| GSMUA_Achr6P35060_001 | Banana | cytosol, extracellular, plastid | 69.17 | 72.17 |
| Zm00001d050535_P001 | Maize | cytosol | 70.83 | 71.43 |
| AT2G04900.1 | Thale cress | plastid | 70.83 | 66.41 |
| VIT_12s0059g01530.t01 | Wine grape | cytosol, extracellular | 65.83 | 66.39 |
| CDY27860 | Canola | cytosol, mitochondrion, plastid | 70.0 | 65.62 |
| CDY00884 | Canola | cytosol, mitochondrion, plastid | 70.0 | 65.62 |
| VIT_12s0059g01490.t01 | Wine grape | mitochondrion | 64.17 | 65.25 |
| Zm00001d040070_P001 | Maize | extracellular, plastid | 63.33 | 64.96 |
| PGSC0003DMT400015679 | Potato | mitochondrion | 73.33 | 61.54 |
| CDY05730 | Canola | extracellular | 29.17 | 47.3 |
| CDY05068 | Canola | extracellular | 29.17 | 47.3 |
| Zm00001d030155_P001 | Maize | cytosol | 60.83 | 29.92 |
| Zm00001d024394_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 64.17 | 23.91 |
Protein Annotations
| EMBL:AK062777 | EnsemblPlants:Os03t0751000-01 | EnsemblPlantsGene:Os03g0751000 | EntrezGene:4334128 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:DUF423 | PANTHER:PTHR43461 | PFAM:PF04241 | ProteinID:AAR87242.1 | ProteinID:ABF98903.1 |
| ProteinID:BAF13203.1 | ProteinID:BAS86413.1 | ProteinID:EEE59937.1 | RefSeq:XP_015630686.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000022DF4B | UniProt:Q75LL8 | MapMan:35.2 | : | : | : |
Description
Protein of unknown function DUF423 family protein. (Os03t0751000-01)
Coordinates
chr3:+:30949749..30950760
Molecular Weight (calculated)
12702.5 Da
IEP (calculated)
9.695
GRAVY (calculated)
0.494
Length
120 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAMAMK DPSLWHKVAA ISGVAALGLG TYGAHMFRPK NPAYKEVWHT ASLYHLVHTA ALLGAPITKR PDVFGGLLTA GIVLFSGTCY TVAYLEDRKY
101: SSTAPLGGFA FIAAWASLLF
101: SSTAPLGGFA FIAAWASLLF
001: MGNSVRSNLR DIRGRRSMDP RMWHKVAAIS GMAALGLGTY GAHVFKPENP SYKQVWQTAS LYHLVHTAAL VSAPSTKYPN IFGGLLTAGI VAFSGTCYMV
101: ALREDRKFST LAPFGGFAFI AAWATLLF
101: ALREDRKFST LAPFGGFAFI AAWATLLF
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SI36]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.