Factsheet for Zm00001d024394_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, extracellular

Predictor Summary:

extracellular 1
mitochondrion 2
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plasma membrane, plastid
Any Predictor:	extracellular, mitochondrion, plasma membrane
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G400500.1	Wheat	endoplasmic reticulum, extracellular	23.6	66.09
TraesCS5A01G390700.1	Wheat	endoplasmic reticulum, extracellular	23.6	66.09
Os03t0751000-01	Rice	extracellular, plastid	23.91	64.17
Zm00001d040070_P001	Maize	extracellular, plastid	22.98	63.25
GSMUA_Achr6P35050_001	Banana	cytosol	19.88	57.66
OQU90981	Sorghum	mitochondrion	24.22	56.52
Bra015157.1-P	Field mustard	plastid	19.25	55.86
KRH73358	Soybean	cytosol	18.63	54.05
Solyc07g047700.2.1	Tomato	cytosol	18.32	53.15
Zm00001d050535_P001	Maize	cytosol	19.25	52.1
GSMUA_Achr6P35060_001	Banana	cytosol, extracellular, plastid	18.01	50.43
CDY27860	Canola	cytosol, mitochondrion, plastid	19.88	50.0
CDY05730	Canola	extracellular	11.49	50.0
CDY05068	Canola	extracellular	11.49	50.0
CDY00884	Canola	cytosol, mitochondrion, plastid	19.88	50.0
AT2G04900.1	Thale cress	plastid	19.57	49.22
KRH14784	Soybean	cytosol	11.8	48.72
VIT_12s0059g01530.t01	Wine grape	cytosol, extracellular	17.08	46.22
VIT_12s0059g01490.t01	Wine grape	mitochondrion	16.46	44.92
PGSC0003DMT400015679	Potato	mitochondrion	18.94	42.66
Zm00001d030155_P001	Maize	cytosol	17.08	22.54
Zm00001d045280_P001	Maize	extracellular	3.42	9.91

Protein Annotations

EnsemblPlants:Zm00001d024394_P001	EnsemblPlants:Zm00001d024394_T001	EnsemblPlantsGene:Zm00001d024394	Gene3D:3.40.50.1820	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:AB_hydrolase	InterPro:DUF423	InterPro:IPR029058	InterPro:NDRG	PANTHER:PTHR11034
PANTHER:PTHR11034:SF22	PFAM:PF03096	PFAM:PF04241	ProteinID:AQK41110.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI000843E71E	UniProt:A0A1D6IZ13	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr10:+:68650435..68654502

Molecular Weight (calculated)

35032.0 Da

IEP (calculated)

5.537

GRAVY (calculated)

0.500

Length

322 amino acids

Sequence
(BLAST)

001: MATRQPVRLV LDASLLLDPS CTREAAVVAL RPGVEELLRR LRYSNLTMAI CYAEGMPTNE VLYLSTLLLH PSEVASSEVH IDNICFLLPY LPIMAHGVSI
101: LSCRLQRMAS SNECSIEVPG VLIVQRLQQL LLTLATLIKR RCGSVTIAVY GDEDKPALIT YPDVALNYMS CFQGFFFCPE VASLLLHNFC VYHINPQGHE
201: MGAAPMSSDV LVPSVADLAN QVADVLDFFG LVVDLQAATD LMLWHKVASV SGVATLGLGT YGAHMFRPKN PAYKEFGGLL TAGIVLFSGT CYTVAYLEDM
301: KFSSPAPLGG FAFIAAWASL LF

Best Arabidopsis Sequence Match ( AT2G19620.2 )
(BLAST)

001: MEHHVKTCHG SVSVVVYGDQ EKPALITYPD VALNYMSCFQ GLFLCPEAVS LLLHNFCIYH ISPPGHEFGA APVCSNDPSP SVEDLADQIL EVLNFFSLEA
101: VMCMGITAGA YILSLFAIKH KERVLGLILI SPLCKAPSWS EWFYYKVVSN LLYYYGMSGL LKDIFLQRYF SKEARGSSEV PERDVVHECR RLLGERHGSS
201: LMRFLEAVNR RHDLTDGLKS LKCRTLIFVG DQSPFHSETL HMVTALDRKY SALVEVQACG SMVTEEQPHA MLIPMEFFFM GFGLYRPGRV SDSPRSPLSP
301: SCISPELLSP ESLGLKLKPI KTRVPTKC

Arabidopsis Description

NDL3Protein NDL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUN1]
SUBAcon: [plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.