Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040070_P001 | Maize | extracellular, plastid | 12.61 | 11.97 |
| Zm00001d050535_P001 | Maize | cytosol | 9.91 | 9.24 |
| Zm00001d030155_P001 | Maize | cytosol | 10.81 | 4.92 |
| Zm00001d024394_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 9.91 | 3.42 |
Protein Annotations
| EnsemblPlants:Zm00001d045280_P001 | EnsemblPlants:Zm00001d045280_T001 | EnsemblPlantsGene:Zm00001d045280 | ProteinID:AQL01969.1 | UniParc:UPI000220EB1B | UniProt:A0A1D6NV17 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:17826549..17827503
Molecular Weight (calculated)
12272.2 Da
IEP (calculated)
6.768
GRAVY (calculated)
0.505
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGRPVRLV LDASLLLDPS STREAAAVAL RPGVEELLRR LRYSNLTVAI CYAEGMPTNE VLYLSTLLLH PFEVVSSEVH IDSIFFLLPY LPIMAHGVSI
101: LSCRLQRMAS C
101: LSCRLQRMAS C
001: MQALKEAPAD MQCRDKLLFQ CKVVEPETTA KDVTSEMFSK EAGHPAEETR LKVMYVTPPQ PPSPVQEGTE EGSSPRASVS DNGNASEAFV DMLRSLLVPL
101: FSNAASSTDD HGITLPQYQV FINFRGDELR NSFVGFLVKA MRLEKINVFT DEVELRGTNL NYLFRRIEES RVAVAIFSER YTESCWCLDE LVKMKEQMEQ
201: GKLVVVPVFY RLNATACKRF MGAFGDNLRN LEWEYRSEPE RIQKWKEALS SVFSNIGLTS DIRSNESKFV DSIVEEVKKV LIKIADNFFK DHLPWKFPRL
301: TLTDGTTIYI KRSYFVGFLV QETANVSLDD HDLRDSPLVT NYVCFTTPIN DLLKFHTLLI SLSHKVSSKV HHSSLFFATM YLFEFESFTF IVWLSPT
101: FSNAASSTDD HGITLPQYQV FINFRGDELR NSFVGFLVKA MRLEKINVFT DEVELRGTNL NYLFRRIEES RVAVAIFSER YTESCWCLDE LVKMKEQMEQ
201: GKLVVVPVFY RLNATACKRF MGAFGDNLRN LEWEYRSEPE RIQKWKEALS SVFSNIGLTS DIRSNESKFV DSIVEEVKKV LIKIADNFFK DHLPWKFPRL
301: TLTDGTTIYI KRSYFVGFLV QETANVSLDD HDLRDSPLVT NYVCFTTPIN DLLKFHTLLI SLSHKVSSKV HHSSLFFATM YLFEFESFTF IVWLSPT
Arabidopsis Description
Vesicle-associated protein 1-4 [Source:UniProtKB/TrEMBL;Acc:F4I818]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.