Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G400500.1 | Wheat | endoplasmic reticulum, extracellular | 70.59 | 73.04 |
| TraesCS5A01G390700.1 | Wheat | endoplasmic reticulum, extracellular | 70.59 | 73.04 |
| Os03t0751000-01 | Rice | extracellular, plastid | 71.43 | 70.83 |
| GSMUA_Achr6P35050_001 | Banana | cytosol | 62.18 | 66.67 |
| Solyc07g047700.2.1 | Tomato | cytosol | 59.66 | 63.96 |
| OQU90981 | Sorghum | mitochondrion | 73.95 | 63.77 |
| KRH73358 | Soybean | cytosol | 58.82 | 63.06 |
| Bra015157.1-P | Field mustard | plastid | 57.98 | 62.16 |
| KRH14784 | Soybean | cytosol | 39.5 | 60.26 |
| GSMUA_Achr6P35060_001 | Banana | cytosol, extracellular, plastid | 55.46 | 57.39 |
| CDY00884 | Canola | cytosol, mitochondrion, plastid | 57.98 | 53.91 |
| Zm00001d040070_P001 | Maize | extracellular, plastid | 52.94 | 53.85 |
| VIT_12s0059g01530.t01 | Wine grape | cytosol, extracellular | 53.78 | 53.78 |
| VIT_12s0059g01490.t01 | Wine grape | mitochondrion | 52.94 | 53.39 |
| CDY27860 | Canola | cytosol, mitochondrion, plastid | 57.14 | 53.12 |
| AT2G04900.1 | Thale cress | plastid | 57.14 | 53.12 |
| PGSC0003DMT400015679 | Potato | mitochondrion | 60.5 | 50.35 |
| CDY05730 | Canola | extracellular | 26.05 | 41.89 |
| CDY05068 | Canola | extracellular | 26.05 | 41.89 |
| Zm00001d030155_P001 | Maize | cytosol | 60.5 | 29.51 |
| Zm00001d024394_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 52.1 | 19.25 |
| Zm00001d045280_P001 | Maize | extracellular | 9.24 | 9.91 |
Protein Annotations
| EnsemblPlants:Zm00001d050535_P001 | EnsemblPlants:Zm00001d050535_T001 | EnsemblPlantsGene:Zm00001d050535 | EntrezGene:103653566 | InterPro:DUF423 | PANTHER:PTHR43461 |
| PFAM:PF04241 | ProteinID:AQK52681.1 | UniParc:UPI000844726A | UniProt:A0A1D6Q254 | MapMan:35.2 | : |
Description
UPF0451 C17orf61-like protein
Coordinates
chr4:+:97967491..97968541
Molecular Weight (calculated)
13361.4 Da
IEP (calculated)
10.564
GRAVY (calculated)
0.139
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRHKVVAVS GVATLGLDTY DAHMFRPKNP TYKEVWHTAS LYHLVHTAAL LGAPITKRPN VVIRRAPRRW DRALLWNVSI CPPLAKTCYT VAYLEDRKFS
101: SPAPLGGFAF IAAWASLLF
101: SPAPLGGFAF IAAWASLLF
1: MGNSVRSNLR DIRGRRSMDP RMWHKVAAIS GMAALGLGTY GAHVFKPENP SYKQVWQTAS LYHLVHTAAL VSAPSTKYPN IFGGLLTAGI VAFSGT
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SI36]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.