Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015157.1-P | Field mustard | plastid | 85.16 | 98.2 |
| CDY00884 | Canola | cytosol, mitochondrion, plastid | 96.09 | 96.09 |
| CDY27860 | Canola | cytosol, mitochondrion, plastid | 95.31 | 95.31 |
| KRH14784 | Soybean | cytosol | 51.56 | 84.62 |
| KRH73358 | Soybean | cytosol | 69.53 | 80.18 |
| GSMUA_Achr6P35050_001 | Banana | cytosol | 68.75 | 79.28 |
| Solyc07g047700.2.1 | Tomato | cytosol | 68.75 | 79.28 |
| TraesCS5D01G400500.1 | Wheat | endoplasmic reticulum, extracellular | 67.19 | 74.78 |
| TraesCS5A01G390700.1 | Wheat | endoplasmic reticulum, extracellular | 67.19 | 74.78 |
| GSMUA_Achr6P35060_001 | Banana | cytosol, extracellular, plastid | 64.84 | 72.17 |
| Os03t0751000-01 | Rice | extracellular, plastid | 66.41 | 70.83 |
| VIT_12s0059g01490.t01 | Wine grape | mitochondrion | 61.72 | 66.95 |
| VIT_12s0059g01530.t01 | Wine grape | cytosol, extracellular | 60.94 | 65.55 |
| OQU90981 | Sorghum | mitochondrion | 67.97 | 63.04 |
| PGSC0003DMT400015679 | Potato | mitochondrion | 70.31 | 62.94 |
| CDY05730 | Canola | extracellular | 33.59 | 58.11 |
| CDY05068 | Canola | extracellular | 33.59 | 58.11 |
| Zm00001d050535_P001 | Maize | cytosol | 53.12 | 57.14 |
| Zm00001d040070_P001 | Maize | extracellular, plastid | 50.0 | 54.7 |
| Zm00001d030155_P001 | Maize | cytosol | 47.66 | 25.0 |
| Zm00001d024394_P001 | Maize | extracellular, mitochondrion, plasma membrane, plastid | 49.22 | 19.57 |
Protein Annotations
| MapMan:35.2 | EntrezGene:815037 | ProteinID:AAD25581.2 | ProteinID:AAM15336.1 | ProteinID:AEC05883.1 | ArrayExpress:AT2G04900 |
| EnsemblPlantsGene:AT2G04900 | RefSeq:AT2G04900 | TAIR:AT2G04900 | RefSeq:AT2G04900-TAIR-G | EnsemblPlants:AT2G04900.1 | TAIR:AT2G04900.1 |
| InterPro:DUF423 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_565317.1 | PFAM:PF04241 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR43461 | UniProt:Q9SI36 | TMHMM:TMhelix |
| UniParc:UPI00000A8E7A | : | : | : | : | : |
Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9SI36]
Coordinates
chr2:+:1722481..1723976
Molecular Weight (calculated)
13957.0 Da
IEP (calculated)
10.636
GRAVY (calculated)
0.177
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSVRSNLR DIRGRRSMDP RMWHKVAAIS GMAALGLGTY GAHVFKPENP SYKQVWQTAS LYHLVHTAAL VSAPSTKYPN IFGGLLTAGI VAFSGTCYMV
101: ALREDRKFST LAPFGGFAFI AAWATLLF
101: ALREDRKFST LAPFGGFAFI AAWATLLF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.