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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • plastid 2
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:plasma membrane
MultiLoc:plasma membrane
Plant-mPloc:cytosol, plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035001.1-P Field mustard plasma membrane 100.0 100.0
CDY08687 Canola plasma membrane 99.51 99.51
AT3G44220.1 Thale cress plasma membrane 94.17 94.17
CDX92375 Canola plasma membrane 68.45 68.12
CDX98590 Canola plasma membrane 68.45 68.12
CDY35671 Canola plasma membrane 67.96 66.99
CDY09123 Canola plasma membrane 67.48 66.51
PGSC0003DMT400015090 Potato plasma membrane 59.71 59.13
VIT_06s0080g01200.t01 Wine grape plasma membrane 59.71 59.13
Solyc06g074040.1.1 Tomato plasma membrane 59.71 59.13
CDY29084 Canola mitochondrion 47.09 56.4
Solyc11g068890.1.1 Tomato plasma membrane 56.8 55.98
PGSC0003DMT400050538 Potato plasma membrane 56.8 55.98
CDX90600 Canola plasma membrane 55.34 54.81
CDY68967 Canola cytosol 54.85 54.33
CDY69198 Canola cytosol 54.85 54.33
CDY72430 Canola cytosol 53.88 53.37
KRH26671 Soybean plasma membrane 56.8 52.94
CDY01043 Canola mitochondrion 53.4 51.89
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 44.17 51.7
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 53.4 51.64
CDY32068 Canola plasma membrane 51.46 51.46
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 52.91 51.42
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 53.4 51.4
CDY40419 Canola plasma membrane 51.46 50.96
GSMUA_Achr10P... Banana plasma membrane 51.46 50.24
GSMUA_Achr9P08960_001 Banana plasma membrane 50.0 49.05
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 22.82 48.96
KRH22643 Soybean plasma membrane 51.46 48.62
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 49.51 48.34
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 40.78 48.0
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 47.09 46.63
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 46.6 46.15
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 39.81 45.81
Os12t0159600-01 Rice plastid 47.09 45.75
Os11t0157200-03 Rice plasma membrane 46.6 45.71
TraesCS5D01G133300.1 Wheat cytosol 46.12 45.67
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 47.09 45.54
EES16682 Sorghum golgi, plasma membrane, plastid 47.09 45.33
HORVU7Hr1G078320.1 Barley cytosol 47.09 44.91
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 47.09 44.91
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 47.09 44.91
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 46.6 44.86
Zm00001d016733_P001 Maize extracellular, plasma membrane 40.78 44.68
GSMUA_Achr8P34450_001 Banana plasma membrane 45.15 44.5
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 46.6 44.44
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 44.66 44.23
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 45.15 43.66
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 45.15 43.66
Zm00001d023468_P001 Maize extracellular 45.15 43.66
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 44.66 43.4
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 44.66 43.19
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 44.66 43.19
Zm00001d052776_P001 Maize extracellular 44.66 43.19
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 46.12 42.99
Os04t0685400-01 Rice golgi, plasma membrane, plastid 45.63 42.73
CDY55755 Canola plasma membrane 44.17 42.72
Zm00001d026664_P001 Maize extracellular 45.63 42.53
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 44.17 42.52
EES08013 Sorghum golgi, plasma membrane, plastid 44.17 42.52
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 44.17 42.52
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 45.15 42.08
EES13132 Sorghum cytosol 44.66 42.01
CDX81001 Canola plastid 43.69 41.86
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 44.66 41.63
EES06921 Sorghum endoplasmic reticulum 42.72 41.51
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.2 41.4
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 43.2 41.4
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.2 41.4
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 43.69 40.91
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 44.17 40.09
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 42.23 39.01
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 40.78 38.89
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 40.78 38.89
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 40.78 38.89
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 40.78 38.89
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 42.23 38.84
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 40.29 38.43
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 39.81 38.32
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 39.81 38.32
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 39.81 38.32
EES12138 Sorghum extracellular, golgi, plasma membrane 40.78 38.01
HORVU2Hr1G040910.1 Barley peroxisome 43.2 37.4
Os04t0416700-01 Rice golgi, plasma membrane 39.81 37.27
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 40.29 36.89
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 39.81 36.61
CDX95339 Canola plasma membrane 52.91 36.58
HORVU5Hr1G040160.3 Barley golgi, peroxisome 47.09 35.53
CDY28821 Canola endoplasmic reticulum, nucleus, plasma membrane 36.41 35.21
CDY51789 Canola endoplasmic reticulum, nucleus, plasma membrane 36.41 35.21
CDY20226 Canola endoplasmic reticulum, nucleus, plasma membrane 35.92 34.74
CDY14357 Canola plastid 35.44 34.27
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 26.21 27.14
CDY51712 Canola cytosol, peroxisome, plasma membrane 28.64 25.54
CDY07145 Canola cytosol, peroxisome, plasma membrane 28.16 25.0
CDX91852 Canola cytosol, peroxisome, plasma membrane 27.67 24.89
CDX74380 Canola cytosol, peroxisome, plasma membrane 27.67 24.89
Protein Annotations
EnsemblPlants:CDY69513EnsemblPlantsGene:GSBRNA2T00088470001GO:A0A078JPK7GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF17PFAM:PF03168ProteinID:CDY69513ProteinID:CDY69513.1
SEG:segTMHMM:TMhelixUniParc:UPI000253E5CBUniProt:A0A078JPK7MapMan:35.1:
Description
BnaAnng30660DBnaAnng30660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JPK7]
Coordinates
chrLK039596:-:986..2371
Molecular Weight (calculated)
23149.9 Da
IEP (calculated)
7.659
GRAVY (calculated)
0.056
Length
206 amino acids
Sequence
(BLAST)
001: MTEKECEHHH DEDEKMRRRI GAAVLGLLAA GLFVVFLVWA ILHPHGPRFV LQDATIYAFN ISEPNFLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTV WSPFLYGTSV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWISGR YRLHVNCPAY ITLAGHFSGE GPAVKYQLVQ
201: RCGVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.