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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020177.1-P Field mustard plasma membrane 98.56 98.56
CDY35671 Canola plasma membrane 95.22 95.22
CDX92375 Canola plasma membrane 84.21 85.02
CDX98590 Canola plasma membrane 83.73 84.54
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 68.9 68.57
CDY69513 Canola plasma membrane 66.51 67.48
CDY08687 Canola plasma membrane 66.03 66.99
VIT_06s0080g01200.t01 Wine grape plasma membrane 50.72 50.96
PGSC0003DMT400015090 Potato plasma membrane 48.8 49.04
Solyc06g074040.1.1 Tomato plasma membrane 48.8 49.04
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 47.85 46.95
PGSC0003DMT400050538 Potato plasma membrane 45.93 45.93
CDY29084 Canola mitochondrion 37.8 45.93
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 46.89 45.79
CDX90600 Canola plasma membrane 45.45 45.67
CDY69198 Canola cytosol 45.45 45.67
CDY68967 Canola cytosol 45.45 45.67
Solyc11g068890.1.1 Tomato plasma membrane 45.45 45.45
CDY40419 Canola plasma membrane 44.98 45.19
CDY32068 Canola plasma membrane 44.5 45.15
CDY72430 Canola cytosol 44.5 44.71
CDY01043 Canola mitochondrion 44.98 44.34
KRH26671 Soybean plasma membrane 46.41 43.89
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 44.5 43.87
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 20.1 43.75
KRH22643 Soybean plasma membrane 44.98 43.12
Zm00001d016733_P001 Maize extracellular, plasma membrane 38.28 42.55
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 42.58 42.18
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 35.41 42.05
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 34.93 41.71
GSMUA_Achr10P... Banana plasma membrane 42.11 41.71
Os11t0157200-03 Rice plasma membrane 41.63 41.43
GSMUA_Achr9P08960_001 Banana plasma membrane 41.63 41.43
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 40.19 40.38
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 41.15 40.38
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 39.71 39.9
GSMUA_Achr8P34450_001 Banana plasma membrane 39.71 39.71
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 33.97 39.66
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 40.19 39.44
TraesCS5D01G133300.1 Wheat cytosol 39.23 39.42
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 39.71 39.15
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 40.19 39.07
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 40.19 39.07
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 39.71 38.97
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 39.71 38.97
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 39.71 38.78
EES06921 Sorghum endoplasmic reticulum 39.23 38.68
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 39.23 38.5
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 38.28 38.46
EES16682 Sorghum golgi, plasma membrane, plastid 39.23 38.32
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 39.23 38.14
Zm00001d052776_P001 Maize extracellular 38.76 38.03
EES12138 Sorghum extracellular, golgi, plasma membrane 39.71 37.56
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 38.76 37.5
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 38.76 37.5
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 38.76 37.5
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 38.28 37.38
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 38.28 37.38
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 38.28 37.38
Os12t0159600-01 Rice plastid 37.8 37.26
Zm00001d023468_P001 Maize extracellular 37.8 37.09
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 38.28 37.04
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 38.28 37.04
EES08013 Sorghum golgi, plasma membrane, plastid 37.8 36.92
Os04t0416700-01 Rice golgi, plasma membrane 38.76 36.82
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 39.23 36.44
CDY55755 Canola plasma membrane 36.84 36.15
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 36.84 35.98
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 37.8 35.75
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 37.8 35.75
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.84 35.65
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.84 35.65
HORVU7Hr1G078320.1 Barley cytosol 36.84 35.65
Os04t0685400-01 Rice golgi, plasma membrane, plastid 37.32 35.45
CDX81001 Canola plastid 36.36 35.35
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 37.32 35.29
Zm00001d026664_P001 Maize extracellular 37.32 35.29
HORVU2Hr1G040910.1 Barley peroxisome 40.19 35.29
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 37.8 35.27
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 37.8 35.27
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.36 35.19
EES13132 Sorghum cytosol 36.84 35.16
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 35.89 35.05
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 36.36 34.55
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 35.89 33.63
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 35.41 32.6
CDY51789 Canola endoplasmic reticulum, nucleus, plasma membrane 33.01 32.39
CDY28821 Canola endoplasmic reticulum, nucleus, plasma membrane 33.01 32.39
CDY20226 Canola endoplasmic reticulum, nucleus, plasma membrane 33.01 32.39
CDY14357 Canola plastid 32.54 31.92
HORVU5Hr1G040160.3 Barley golgi, peroxisome 40.67 31.14
CDX95339 Canola plasma membrane 43.54 30.54
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 22.97 24.12
CDY07145 Canola cytosol, peroxisome, plasma membrane 24.4 21.98
CDY51712 Canola cytosol, peroxisome, plasma membrane 23.92 21.64
CDX91852 Canola cytosol, peroxisome, plasma membrane 23.45 21.4
CDX74380 Canola cytosol, peroxisome, plasma membrane 23.45 21.4
Protein Annotations
EnsemblPlants:CDY09123EnsemblPlantsGene:GSBRNA2T00001351001GO:A0A078FB93GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF17PFAM:PF03168ProteinID:CDY09123ProteinID:CDY09123.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EEB967UniProt:A0A078FB93MapMan:35.1:
Description
BnaA02g05490DBnaA02g05490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB93]
Coordinates
chrLK031993:+:244657..245475
Molecular Weight (calculated)
23215.1 Da
IEP (calculated)
5.221
GRAVY (calculated)
0.191
Length
209 amino acids
Sequence
(BLAST)
001: MTEKEKKCEI DYSKYVDAAT KRIVYGCIGL VVTVAVVVFL VWAILHPHKM DFVLQDVTIY EFNISQPNLL TSNLQVTLSS HNPNDKIGIL YERLDIYASY
101: RNQEVTLAHL LPETYQGHLE VTVWSPVLTG TAVSVEPYLT PALNEDINAG MVLLNIKIDG CVKWKVGTWV SECYRLLVNC PASIPFSGQL AGTGPAIKDQ
201: LAQQCAVDV
Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)
001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV
Arabidopsis Description
NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [golgi,plasma membrane,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.