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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • cytosol 2
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006927.1-P Field mustard cytosol 99.52 99.52
CDY68967 Canola cytosol 99.52 99.52
CDX90600 Canola plasma membrane 94.71 94.71
CDY72430 Canola cytosol 93.75 93.75
CDY29084 Canola mitochondrion 75.48 91.28
AT3G52470.1 Thale cress extracellular, plasma membrane 87.02 87.02
CDY32068 Canola plasma membrane 74.52 75.24
CDY40419 Canola plasma membrane 74.04 74.04
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 66.83 65.57
CDY01043 Canola mitochondrion 66.35 65.09
CDX95339 Canola plasma membrane 91.83 64.09
KRH72197 Soybean plasma membrane 55.77 56.04
KRH32836 Soybean plasma membrane 56.25 55.98
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.29 55.56
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 56.25 55.45
CDY08687 Canola plasma membrane 54.33 54.85
CDY69513 Canola plasma membrane 54.33 54.85
KRG96252 Soybean plasma membrane 55.29 54.76
PGSC0003DMT400042351 Potato extracellular, plasma membrane 53.85 53.08
PGSC0003DMT400072342 Potato extracellular, plasma membrane 53.37 52.61
CDY55755 Canola plasma membrane 50.96 49.77
CDX81001 Canola plastid 49.04 47.44
CDY35671 Canola plasma membrane 47.6 47.37
CDX92375 Canola plasma membrane 47.12 47.34
CDX98590 Canola plasma membrane 47.12 47.34
Os11t0157200-03 Rice plasma membrane 47.12 46.67
GSMUA_Achr9P08960_001 Banana plasma membrane 47.12 46.67
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 46.15 46.15
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 46.15 46.15
GSMUA_Achr10P... Banana plasma membrane 46.63 45.97
CDY09123 Canola plasma membrane 45.67 45.45
KRH67997 Soybean plastid 54.81 45.24
Zm00001d052776_P001 Maize extracellular 45.67 44.6
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 45.67 44.6
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 45.67 44.6
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 37.5 44.57
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 45.67 44.39
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 44.23 44.23
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 37.98 44.13
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 45.19 44.13
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 45.19 44.13
GSMUA_Achr8P34450_001 Banana plasma membrane 44.23 44.02
EES16682 Sorghum golgi, plasma membrane, plastid 45.19 43.93
Os12t0159600-01 Rice plastid 44.71 43.87
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 44.23 43.6
TraesCS5D01G133300.1 Wheat cytosol 42.79 42.79
Zm00001d023468_P001 Maize extracellular 43.75 42.72
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.75 42.72
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 43.27 42.45
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 35.58 42.05
EES08013 Sorghum golgi, plasma membrane, plastid 42.79 41.59
HORVU7Hr1G078320.1 Barley cytosol 42.79 41.2
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.79 41.2
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.31 40.74
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 42.31 40.74
Zm00001d016733_P001 Maize extracellular, plasma membrane 36.06 39.89
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 18.27 39.58
Os04t0685400-01 Rice golgi, plasma membrane, plastid 41.83 39.55
EES13132 Sorghum cytosol 41.35 39.27
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 40.38 39.25
Zm00001d026664_P001 Maize extracellular 41.35 38.91
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 38.94 37.85
EES06921 Sorghum endoplasmic reticulum 38.46 37.74
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 38.94 37.67
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 38.94 37.67
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.94 37.67
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 40.38 37.67
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 39.9 37.56
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 39.42 37.1
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 39.42 37.1
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.5 36.45
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.5 36.45
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.5 36.45
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 39.42 36.12
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 37.5 36.11
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 37.98 35.91
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 37.02 35.65
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 37.02 35.65
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 37.02 35.65
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 38.46 35.56
HORVU5Hr1G040160.3 Barley golgi, peroxisome 46.63 35.53
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 36.54 35.19
EES12138 Sorghum extracellular, golgi, plasma membrane 37.02 34.84
Os04t0416700-01 Rice golgi, plasma membrane 36.54 34.55
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 37.02 34.38
HORVU2Hr1G040910.1 Barley peroxisome 38.94 34.03
CDY14357 Canola plastid 34.62 33.8
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 36.06 33.48
CDY28821 Canola endoplasmic reticulum, nucleus, plasma membrane 34.13 33.33
CDY51789 Canola endoplasmic reticulum, nucleus, plasma membrane 34.13 33.33
CDY20226 Canola endoplasmic reticulum, nucleus, plasma membrane 33.65 32.86
CDY51712 Canola cytosol, peroxisome, plasma membrane 26.92 24.24
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 22.6 23.62
CDX91852 Canola cytosol, peroxisome, plasma membrane 25.96 23.58
CDY07145 Canola cytosol, peroxisome, plasma membrane 25.96 23.28
CDX74380 Canola cytosol, peroxisome, plasma membrane 25.48 23.14
Protein Annotations
EnsemblPlants:CDY69198EnsemblPlantsGene:GSBRNA2T00083896001GO:A0A078JNS8GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF2PFAM:PF03168ProteinID:CDY69198ProteinID:CDY69198.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EB82EAUniProt:A0A078JNS8MapMan:35.1:
Description
BnaCnng62320DBnaCnng62320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNS8]
Coordinates
chrLK038839:+:981..1607
Molecular Weight (calculated)
23119.3 Da
IEP (calculated)
10.345
GRAVY (calculated)
0.127
Length
208 amino acids
Sequence
(BLAST)
001: MSKDCGNHGG GKEAAVRRIL TAVIAFIIIV LITIFLVWAI LRPTKPRFVL QDATVFAFNL SQPHLLTTNF QITFASRNPN SKIGIYYDRL HVYATYRNQQ
101: ITLRTAIPPT YQGHKEDNIW SPFVYGTAVP IAPYNSVALG EEQGRGFVGL MIRADGRVRW KVGTLITGKY HIHVRCPAYI NLGNKAAGVI VGDNAVKYTL
201: VTKCTVNV
Best Arabidopsis Sequence Match ( AT3G52470.1 )
(BLAST)
001: MSKDCGNHGG GKEVVVRKLC AAIIAFIVIV LITIFLVWVI LRPTKPRFVL QDATVYAFNL SQPNLLTSNF QVTIASRNPN SKIGIYYDRL HVYATYMNQQ
101: ITLRTAIPPT YQGHKEVNVW SPFVYGTAVP IAPYNSVALG EEKDRGFVGL MIRADGTVRW KVRTLITGKY HIHVRCQAFI NLGNKAAGVL VGDNAVKYTL
201: ANKCSVNV
Arabidopsis Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SVC8]
SUBAcon: [extracellular,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.