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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • peroxisome 1
  • plasma membrane 3
  • plastid 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
EpiLoc:extracellular
MultiLoc:peroxisome
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 73.57 78.04
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 71.81 76.17
HORVU7Hr1G078320.1 Barley cytosol 70.93 74.54
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 70.48 74.07
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 70.48 74.07
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 70.04 73.61
Os04t0685400-01 Rice golgi, plasma membrane, plastid 61.67 63.64
GSMUA_Achr8P34450_001 Banana plasma membrane 47.14 51.2
GSMUA_Achr10P... Banana plasma membrane 47.14 50.71
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 47.14 50.71
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 38.77 50.0
Os12t0159600-01 Rice plastid 46.7 50.0
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 37.89 48.04
PGSC0003DMT400015090 Potato plasma membrane 43.61 47.6
Os11t0157200-03 Rice plasma membrane 43.61 47.14
Solyc06g074040.1.1 Tomato plasma membrane 43.17 47.12
PGSC0003DMT400050538 Potato plasma membrane 42.73 46.41
Solyc11g068890.1.1 Tomato plasma membrane 42.73 46.41
KRH72197 Soybean plasma membrane 40.97 44.93
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 41.85 44.6
CDY69513 Canola plasma membrane 40.09 44.17
Bra035001.1-P Field mustard plasma membrane 40.09 44.17
PGSC0003DMT400042351 Potato extracellular, plasma membrane 40.97 44.08
KRG96252 Soybean plasma membrane 40.53 43.81
CDY08687 Canola plasma membrane 39.65 43.69
AT3G11660.1 Thale cress plasma membrane 40.09 43.54
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 39.65 43.48
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 40.09 42.92
Bra038671.1-P Field mustard plasma membrane 39.65 42.65
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 39.65 42.65
KRH32836 Soybean plasma membrane 39.21 42.58
KRH26671 Soybean plasma membrane 41.41 42.53
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 39.65 42.45
AT3G44220.1 Thale cress plasma membrane 38.33 42.23
CDY32068 Canola plasma membrane 38.33 42.23
AT5G06330.1 Thale cress plasma membrane 38.33 42.03
CDY01043 Canola mitochondrion 39.21 41.98
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 39.21 41.59
AT2G35960.1 Thale cress endoplasmic reticulum, golgi, plasma membrane 37.89 40.95
CDX90600 Canola plasma membrane 37.44 40.87
Bra017276.1-P Field mustard plasma membrane 37.44 40.87
Bra012801.1-P Field mustard plasma membrane 37.44 40.87
CDY40419 Canola plasma membrane 37.44 40.87
CDY72430 Canola cytosol 37.44 40.87
VIT_06s0080g01200.t01 Wine grape plasma membrane 37.0 40.38
AT3G52470.1 Thale cress extracellular, plasma membrane 37.0 40.38
Bra033428.1-P Field mustard cytosol 37.0 40.38
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 37.89 40.38
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 37.0 40.0
Bra006927.1-P Field mustard cytosol 36.56 39.9
PGSC0003DMT400072342 Potato extracellular, plasma membrane 37.0 39.81
CDY29084 Canola mitochondrion 29.96 39.53
CDY68967 Canola cytosol 36.12 39.42
CDY69198 Canola cytosol 36.12 39.42
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 37.44 37.95
KRH22643 Soybean plasma membrane 36.12 37.61
Bra002396.1-P Field mustard plasma membrane 33.92 37.2
AT2G35970.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 34.36 36.97
AT4G09590.1 Thale cress cytosol, plasma membrane, vacuole 34.36 36.97
Os04t0416700-01 Rice golgi, plasma membrane 35.68 36.82
CDX92375 Canola plasma membrane 33.48 36.72
CDY55755 Canola plasma membrane 34.36 36.62
CDX98590 Canola plasma membrane 33.04 36.23
Bra005892.1-P Field mustard plasma membrane 33.92 36.15
KRH67997 Soybean plastid 40.09 36.11
CDY35671 Canola plasma membrane 33.04 35.89
CDY09123 Canola plasma membrane 32.6 35.41
AT5G05657.1 Thale cress plastid 21.15 35.04
CDX81001 Canola plastid 33.04 34.88
Bra020177.1-P Field mustard plasma membrane 31.72 34.45
CDX95339 Canola plasma membrane 36.56 27.85
Os02t0100600-01 Rice endoplasmic reticulum, golgi, nucleus 25.99 27.57
Os09t0532200-00 Rice plastid 24.67 25.69
Os05t0367900-01 Rice plastid 28.19 24.62
Protein Annotations
MapMan:35.1EntrezGene:4344425EMBL:AK061430EMBL:AK061546EMBL:AK061780EMBL:AK067526
EMBL:AK072003EMBL:AK099239EMBL:AK104488ProteinID:BAD33162.1ProteinID:BAF22681.1ProteinID:BAT03414.1
ProteinID:EAZ41224.1GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0046658InterPro:LEA_2EnsemblPlantsGene:Os08g0102700
EnsemblPlants:Os08t0102700-01PFAM:PF03168PANTHER:PTHR31415PANTHER:PTHR31415:SF7UniProt:Q69U64TMHMM:TMhelix
UniParc:UPI0000226099RefSeq:XP_015650874.1SEG:seg:::
Description
Harpin-induced 1 domain containing protein. (Os08t0102700-01);Harpin-induced 1 domain containing protein. (Os08t0102700-02);Harpin-induced 1 domain containing protein. (Os08t0102700-03);Harpin-induced 1 domain containing protein. (Os08t0102700-04);Harpin-induced 1 domain containing protein. (Os08t0102700-05)
Coordinates
chr8:-:151934..153452
Molecular Weight (calculated)
25210.6 Da
IEP (calculated)
9.131
GRAVY (calculated)
0.137
Length
227 amino acids
Sequence
(BLAST)
001: MSIKHCEQHK DCERQRLYRR CCAAIFGILL LLLLIVLIVW LILRPTKPRF YLNDLTVVCL NVTTGGSYAG ATASSGYFSF LTVTMQTTLA ARNGNERVGI
101: YYDRADVYAE YKGLRITVPT SLPPVYQGHP DLTVWSPFLS GNNVQLPPYL AVSITQDETA GYLLVTIRVD GWIRYKAGAF ITGHYHLRVR CPALLIVNDG
201: RGSYGSNSGG GNGYFRFQRA AACVVDV
Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)
001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV
Arabidopsis Description
NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.