Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038671.1-P | Field mustard | plasma membrane | 89.0 | 88.15 |
| Bra034822.1-P | Field mustard | extracellular, mitochondrion, plasma membrane, plastid | 83.25 | 82.08 |
| CDY01043 | Canola | mitochondrion | 83.25 | 82.08 |
| CDY08506 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 82.3 | 81.13 |
| AT3G52470.1 | Thale cress | extracellular, plasma membrane | 66.51 | 66.83 |
| AT2G35960.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 66.99 | 66.67 |
| AT5G06330.1 | Thale cress | plasma membrane | 66.03 | 66.67 |
| KRH72197 | Soybean | plasma membrane | 60.77 | 61.35 |
| KRH32836 | Soybean | plasma membrane | 61.24 | 61.24 |
| KRG96252 | Soybean | plasma membrane | 60.29 | 60.0 |
| VIT_08s0007g02350.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 58.37 | 58.94 |
| PGSC0003DMT400072342 | Potato | extracellular, plasma membrane | 57.89 | 57.35 |
| AT2G35970.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 56.94 | 56.4 |
| Solyc01g007220.2.1 | Tomato | extracellular, plasma membrane | 56.94 | 56.4 |
| AT4G09590.1 | Thale cress | cytosol, plasma membrane, vacuole | 56.46 | 55.92 |
| PGSC0003DMT400042351 | Potato | extracellular, plasma membrane | 56.46 | 55.92 |
| AT3G44220.1 | Thale cress | plasma membrane | 53.59 | 54.37 |
| KRH67997 | Soybean | plastid | 60.77 | 50.4 |
| GSMUA_Achr9P08960_001 | Banana | plasma membrane | 50.24 | 50.0 |
| AT5G05657.1 | Thale cress | plastid | 32.06 | 48.91 |
| GSMUA_Achr11P... | Banana | cytosol, extracellular, mitochondrion, peroxisome | 39.71 | 46.37 |
| AT5G22200.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 46.41 | 46.19 |
| GSMUA_AchrUn_... | Banana | cytosol, plasma membrane, plastid | 46.89 | 45.79 |
| GSMUA_Achr6P19500_001 | Banana | endoplasmic reticulum, plasma membrane | 45.93 | 45.5 |
| GSMUA_Achr9P29670_001 | Banana | cytosol, extracellular, mitochondrion, plasma membrane | 38.28 | 45.45 |
| TraesCS5B01G125000.1 | Wheat | cytosol, extracellular, plasma membrane | 37.8 | 45.14 |
| GSMUA_Achr8P34450_001 | Banana | plasma membrane | 44.98 | 44.98 |
| TraesCS5D01G133400.1 | Wheat | golgi, plasma membrane, plastid | 44.5 | 44.71 |
| TraesCS5A01G125800.1 | Wheat | golgi, plasma membrane, plastid | 44.5 | 44.71 |
| GSMUA_Achr7P03290_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 44.98 | 44.13 |
| Os11t0157200-03 | Rice | plasma membrane | 44.02 | 43.81 |
| GSMUA_Achr6P35580_001 | Banana | cytosol, extracellular, plastid | 20.1 | 43.75 |
| TraesCS5B01G124900.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 43.54 | 43.75 |
| EES16682 | Sorghum | golgi, plasma membrane, plastid | 44.5 | 43.46 |
| TraesCS5D01G133300.1 | Wheat | cytosol | 42.58 | 42.79 |
| GSMUA_Achr10P... | Banana | plasma membrane | 43.06 | 42.65 |
| Os12t0159600-01 | Rice | plastid | 43.06 | 42.45 |
| Zm00001d052776_P001 | Maize | extracellular | 43.06 | 42.25 |
| Zm00001d023468_P001 | Maize | extracellular | 42.58 | 41.78 |
| HORVU7Hr1G078320.1 | Barley | cytosol | 43.06 | 41.67 |
| TraesCS7B01G227800.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 43.06 | 41.67 |
| Zm00001d041927_P001 | Maize | endoplasmic reticulum, golgi, plasma membrane | 42.11 | 41.51 |
| HORVU4Hr1G021190.1 | Barley | golgi, plasma membrane, plastid | 42.11 | 41.31 |
| TraesCS7A01G327200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 42.58 | 41.2 |
| TraesCS7D01G323900.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 42.58 | 41.2 |
| EES08013 | Sorghum | golgi, plasma membrane, plastid | 42.11 | 41.12 |
| Zm00001d016733_P001 | Maize | extracellular, plasma membrane | 36.84 | 40.96 |
| TraesCS4A01G199700.1 | Wheat | golgi, plasma membrane, plastid | 41.63 | 40.85 |
| TraesCS4B01G115700.1 | Wheat | peroxisome, plasma membrane, plastid | 41.63 | 40.85 |
| TraesCS4D01G113300.1 | Wheat | peroxisome, plasma membrane, plastid | 41.15 | 40.38 |
| Os08t0102700-01 | Rice | cytosol, peroxisome, plasma membrane | 43.54 | 40.09 |
| Os04t0685400-01 | Rice | golgi, plasma membrane, plastid | 42.11 | 40.0 |
| Zm00001d034977_P001 | Maize | cytosol, mitochondrion, peroxisome, plasma membrane | 40.67 | 39.72 |
| EES14353 | Sorghum | cytosol, mitochondrion, peroxisome, plasma membrane | 40.19 | 39.25 |
| EES06921 | Sorghum | endoplasmic reticulum | 39.71 | 39.15 |
| TraesCS2B01G603000.1 | Wheat | cytosol, golgi, plasma membrane | 41.15 | 38.91 |
| TraesCS2D01G596200.1 | Wheat | cytosol, golgi, plasma membrane | 41.15 | 38.91 |
| TraesCS5D01G498400.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 39.71 | 38.78 |
| TraesCS5B01G498200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 39.71 | 38.78 |
| TraesCS5A01G484900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 39.71 | 38.78 |
| HORVU5Hr1G114220.1 | Barley | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 39.71 | 38.43 |
| EES13132 | Sorghum | cytosol | 40.19 | 38.36 |
| TraesCS2A01G583600.1 | Wheat | cytosol, golgi, plasma membrane | 40.19 | 38.01 |
| TraesCS2D01G210700.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 38.76 | 37.67 |
| TraesCS2A01G205300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 38.76 | 37.67 |
| TraesCS2B01G232700.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 38.76 | 37.67 |
| Zm00001d026664_P001 | Maize | extracellular | 39.71 | 37.56 |
| HORVU2Hr1G123370.1 | Barley | cytosol, golgi, plasma membrane | 39.23 | 37.27 |
| TraesCS5A01G125600.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.71 | 37.22 |
| Os02t0538700-01 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 39.71 | 37.05 |
| HORVU2Hr1G073830.1 | Barley | extracellular, plasma membrane | 38.28 | 37.04 |
| Zm00001d003751_P001 | Maize | extracellular, golgi, plasma membrane | 39.71 | 36.89 |
| EES12138 | Sorghum | extracellular, golgi, plasma membrane | 38.76 | 36.65 |
| TraesCS2D01G295700.1 | Wheat | extracellular, plasma membrane | 37.8 | 36.57 |
| TraesCS2B01G313900.1 | Wheat | extracellular, plasma membrane | 37.8 | 36.57 |
| TraesCS2A01G297700.1 | Wheat | extracellular, plasma membrane | 37.32 | 36.11 |
| Os04t0416700-01 | Rice | golgi, plasma membrane | 37.8 | 35.91 |
| Zm00001d025371_P001 | Maize | extracellular, golgi, plasma membrane | 37.32 | 34.82 |
| HORVU5Hr1G040160.3 | Barley | golgi, peroxisome | 44.98 | 34.43 |
| AT5G53730.1 | Thale cress | plastid | 34.93 | 34.27 |
| HORVU2Hr1G040910.1 | Barley | peroxisome | 38.76 | 34.03 |
| AT4G01410.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 29.19 | 26.87 |
| HORVU2Hr1G066420.1 | Barley | mitochondrion, plastid | 23.92 | 25.13 |
Protein Annotations
| MapMan:35.1 | EntrezGene:820338 | UniProt:A0A178VF51 | ProteinID:AAF02134.1 | ProteinID:AEE75080.1 | EMBL:AF264697 |
| ArrayExpress:AT3G11660 | EnsemblPlantsGene:AT3G11660 | RefSeq:AT3G11660 | TAIR:AT3G11660 | RefSeq:AT3G11660-TAIR-G | EnsemblPlants:AT3G11660.1 |
| TAIR:AT3G11660.1 | EMBL:AY088586 | EMBL:BT003850 | EMBL:BT020319 | EMBL:BT020551 | GO:GO:0003674 |
| GO:GO:0004871 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046658 | GO:GO:0051607 | InterPro:LEA_2 |
| Symbol:NHL1 | RefSeq:NP_566396.1 | ProteinID:OAP04899.1 | PFAM:PF03168 | PO:PO:0000013 | PO:PO:0000014 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001185 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31415 | PANTHER:PTHR31415:SF2 | UniProt:Q9SRN0 | TMHMM:TMhelix |
| UniParc:UPI00000A8D08 | SEG:seg | : | : | : | : |
Description
NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
Coordinates
chr3:-:3678595..3679943
Molecular Weight (calculated)
23665.6 Da
IEP (calculated)
10.018
GRAVY (calculated)
0.046
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.