Factsheet for AT2G35960.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	endoplasmic reticulum, golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	82.86	82.46
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	82.86	82.46
CDY32068	Canola	plasma membrane	80.48	82.04
CDY40419	Canola	plasma membrane	80.95	81.73
Bra017276.1-P	Field mustard	plasma membrane	80.95	81.73
AT3G52470.1	Thale cress	extracellular, plasma membrane	80.0	80.77
AT3G11660.1	Thale cress	plasma membrane	66.67	66.99
AT5G06330.1	Thale cress	plasma membrane	59.05	59.9
KRH32836	Soybean	plasma membrane	57.62	57.89
KRH72197	Soybean	plasma membrane	56.67	57.49
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	55.24	56.04
KRG96252	Soybean	plasma membrane	53.81	53.81
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	53.81	53.55
AT3G44220.1	Thale cress	plasma membrane	51.43	52.43
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	52.38	52.13
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	50.48	50.24
AT5G05657.1	Thale cress	plastid	31.43	48.18
GSMUA_Achr9P08960_001	Banana	plasma membrane	48.1	48.1
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	47.62	47.62
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	46.67	45.79
KRH67997	Soybean	plastid	54.29	45.24
GSMUA_Achr10P...	Banana	plasma membrane	45.24	45.02
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	44.29	44.71
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	44.29	44.71
GSMUA_Achr8P34450_001	Banana	plasma membrane	44.29	44.5
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	36.67	44.0
Os11t0157200-03	Rice	plasma membrane	43.81	43.81
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	37.14	43.58
Os12t0159600-01	Rice	plastid	43.81	43.4
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	42.38	42.79
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	35.71	42.61
TraesCS5D01G133300.1	Wheat	cytosol	41.9	42.31
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	42.86	42.25
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	42.38	41.78
TraesCS4D01G113300.1	Wheat	peroxisome, plasma membrane, plastid	42.38	41.78
Zm00001d052776_P001	Maize	extracellular	42.38	41.78
HORVU4Hr1G021190.1	Barley	golgi, plasma membrane, plastid	42.38	41.78
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	41.9	41.51
Zm00001d023468_P001	Maize	extracellular	41.9	41.31
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	41.9	41.31
HORVU7Hr1G078320.1	Barley	cytosol	42.38	41.2
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	42.38	41.2
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	40.95	40.76
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	41.9	40.74
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	41.9	40.74
EES16682	Sorghum	golgi, plasma membrane, plastid	41.43	40.65
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	40.95	40.19
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	18.1	39.58
Zm00001d016733_P001	Maize	extracellular, plasma membrane	35.24	39.36
EES13132	Sorghum	cytosol	40.95	39.27
EES08013	Sorghum	golgi, plasma membrane, plastid	40.0	39.25
EES14353	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	39.52	38.78
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	40.0	38.18
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	40.0	38.01
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	40.95	37.89
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	39.52	37.56
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	39.52	37.56
Zm00001d026664_P001	Maize	extracellular	39.52	37.56
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	39.52	37.22
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	38.57	36.82
Os04t0416700-01	Rice	golgi, plasma membrane	37.14	35.45
EES06921	Sorghum	endoplasmic reticulum	35.71	35.38
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	36.19	35.19
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	45.24	34.8
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	35.71	34.72
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	35.71	34.72
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	35.71	34.72
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	35.24	34.42
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	35.24	34.42
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.24	34.42
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	36.67	34.22
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	34.76	34.11
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	34.76	34.11
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	34.76	34.11
EES12138	Sorghum	extracellular, golgi, plasma membrane	35.71	33.94
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	35.71	33.48
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	34.29	33.33
AT5G53730.1	Thale cress	plastid	33.33	32.86
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	34.29	32.14
HORVU2Hr1G040910.1	Barley	peroxisome	34.76	30.67
HORVU2Hr1G066420.1	Barley	mitochondrion, plastid	24.29	25.63
AT4G01410.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	27.62	25.55

Protein Annotations

MapMan:35.1	EntrezGene:818169	ProteinID:AAD21461.1	ProteinID:AEC09183.1	EMBL:AK175879	ArrayExpress:AT2G35960
EnsemblPlantsGene:AT2G35960	RefSeq:AT2G35960	TAIR:AT2G35960	RefSeq:AT2G35960-TAIR-G	EnsemblPlants:AT2G35960.1	TAIR:AT2G35960.1
EMBL:AY085897	Unigene:At.37608	EMBL:BT025781	GO:GO:0003674	GO:GO:0004871	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0046658
InterPro:LEA_2	Symbol:NHL12	RefSeq:NP_181140.1	PFAM:PF03168	PO:PO:0000013	PO:PO:0000014
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009001
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
PANTHER:PTHR31415	PANTHER:PTHR31415:SF2	UniProt:Q9SJ54	TMHMM:TMhelix	UniParc:UPI000009C6F3	SEG:seg

Description

NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]

Coordinates

chr2:+:15106940..15108086

Molecular Weight (calculated)

23264.3 Da

IEP (calculated)

10.130

GRAVY (calculated)

0.105

Length

210 amino acids

Sequence
(BLAST)

001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.