Factsheet for TraesCS5A01G484900.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

mitochondrion 1
extracellular 3
endoplasmic reticulum 3
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	96.73	96.73
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	96.73	96.73
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	92.99	92.13
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	83.18	82.79
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	83.18	79.46
Zm00001d016733_P001	Maize	extracellular, plasma membrane	68.69	78.19
EES06921	Sorghum	endoplasmic reticulum	74.77	75.47
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	65.89	65.28
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	52.8	54.33
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	24.3	54.17
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	51.87	52.11
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	47.66	45.74
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	46.26	44.8
GSMUA_Achr9P08960_001	Banana	plasma membrane	43.93	44.76
Bra002396.1-P	Field mustard	plasma membrane	41.59	43.0
CDX92375	Canola	plasma membrane	41.59	43.0
PGSC0003DMT400015090	Potato	plasma membrane	41.59	42.79
CDX98590	Canola	plasma membrane	40.65	42.03
Solyc06g074040.1.1	Tomato	plasma membrane	40.65	41.83
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	40.65	41.43
VIT_06s0080g01200.t01	Wine grape	plasma membrane	39.72	40.87
AT3G44220.1	Thale cress	plasma membrane	38.78	40.29
PGSC0003DMT400050538	Potato	plasma membrane	39.25	40.19
CDY29084	Canola	mitochondrion	32.24	40.12
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	38.78	40.1
Bra035001.1-P	Field mustard	plasma membrane	38.32	39.81
CDY69513	Canola	plasma membrane	38.32	39.81
CDY08687	Canola	plasma membrane	38.32	39.81
AT3G11660.1	Thale cress	plasma membrane	38.78	39.71
Solyc11g068890.1.1	Tomato	plasma membrane	38.78	39.71
KRH32836	Soybean	plasma membrane	38.78	39.71
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.72	39.35
Bra038671.1-P	Field mustard	plasma membrane	38.32	38.86
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	38.78	38.78
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	38.32	38.5
CDY09123	Canola	plasma membrane	37.38	38.28
Bra006927.1-P	Field mustard	cytosol	36.92	37.98
Bra020177.1-P	Field mustard	plasma membrane	36.92	37.8
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	37.38	37.74
KRG96252	Soybean	plasma membrane	36.92	37.62
CDX90600	Canola	plasma membrane	36.45	37.5
CDY69198	Canola	cytosol	36.45	37.5
CDY68967	Canola	cytosol	36.45	37.5
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	36.92	37.26
KRH72197	Soybean	plasma membrane	35.98	37.2
AT5G06330.1	Thale cress	plasma membrane	35.98	37.2
Bra012801.1-P	Field mustard	plasma membrane	35.98	37.02
CDY35671	Canola	plasma membrane	35.98	36.84
CDY01043	Canola	mitochondrion	36.45	36.79
KRH22643	Soybean	plasma membrane	37.38	36.7
KRH26671	Soybean	plasma membrane	37.85	36.65
CDY72430	Canola	cytosol	35.51	36.54
AT3G52470.1	Thale cress	extracellular, plasma membrane	35.51	36.54
Bra033428.1-P	Field mustard	cytosol	35.05	36.06
CDY32068	Canola	plasma membrane	34.58	35.92
Bra017276.1-P	Field mustard	plasma membrane	34.11	35.1
CDY40419	Canola	plasma membrane	34.11	35.1
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	34.11	34.76
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	33.18	33.65
TraesCS5A01G320200.1	Wheat	cytosol, peroxisome, vacuole	35.05	33.33
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	32.71	33.18
CDX81001	Canola	plastid	33.18	33.02
Bra005892.1-P	Field mustard	plasma membrane	32.71	32.86
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	32.24	32.7
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	32.24	32.7
KRH67997	Soybean	plastid	38.32	32.54
CDY55755	Canola	plasma membrane	31.78	31.92
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	31.31	31.75
AT5G05657.1	Thale cress	plastid	18.22	28.47
CDX95339	Canola	plasma membrane	35.05	25.17
TraesCS1A01G232200.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	28.5	24.02
TraesCS7A01G440300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	21.03	22.28
TraesCS6A01G349800.1	Wheat	endoplasmic reticulum	21.03	22.06
TraesCS5A01G098600.1	Wheat	cytosol, endoplasmic reticulum, nucleus	21.03	21.43

Protein Annotations

EnsemblPlants:TraesCS5A01G484900.1	EnsemblPlantsGene:TraesCS5A01G484900	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF15	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5A:-:656210084..656210728

Molecular Weight (calculated)

22662.5 Da

IEP (calculated)

9.469

GRAVY (calculated)

0.261

Length

214 amino acids

Sequence
(BLAST)

001: MSKDRHEHHL RRCCGGLAAC LLFLVVAVAV TALVVYLVLR PAKPSFYLQD LQLRSVSLGD PSLSATAQVT LASRNPNDRV GVLYRRLDVF VTYRDEPVTV
101: PVSLPPAYQG HRDVTIWSPV LSGESVPVAG FVADAMKQDI AAGYVALQVK VDGRVRWKVG SWVSGSYHLF VSCPAVLAAG PGGMPTGGAG LNGTASRAVA
201: SLKFTQPTGC TVGT

Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)

001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV

Arabidopsis Description

NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.