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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • plasma membrane 3
  • plastid 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:extracellular
MultiLoc:plasma membrane
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g074040.1.1 Tomato plasma membrane 97.12 97.12
PGSC0003DMT400050538 Potato plasma membrane 73.56 73.21
VIT_06s0080g01200.t01 Wine grape plasma membrane 60.58 60.58
Bra035001.1-P Field mustard plasma membrane 59.13 59.71
CDY69513 Canola plasma membrane 59.13 59.71
AT3G44220.1 Thale cress plasma membrane 59.13 59.71
CDY08687 Canola plasma membrane 58.65 59.22
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 56.73 55.4
KRH26671 Soybean plasma membrane 58.65 55.2
GSMUA_Achr8P34450_001 Banana plasma membrane 54.33 54.07
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 55.29 53.74
PGSC0003DMT400072342 Potato extracellular, plasma membrane 53.85 53.08
PGSC0003DMT400042351 Potato extracellular, plasma membrane 53.85 53.08
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 53.37 52.86
KRH22643 Soybean plasma membrane 54.81 52.29
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 43.75 51.7
GSMUA_Achr10P... Banana plasma membrane 52.4 51.66
Bra002396.1-P Field mustard plasma membrane 50.96 51.21
CDX92375 Canola plasma membrane 50.48 50.72
GSMUA_Achr9P08960_001 Banana plasma membrane 50.96 50.48
CDX98590 Canola plasma membrane 50.0 50.24
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 50.96 50.24
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 50.96 49.77
CDY35671 Canola plasma membrane 50.0 49.76
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 41.83 49.71
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 49.52 49.52
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 49.52 49.52
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 49.52 49.52
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 42.31 49.16
EES13132 Sorghum cytosol 51.44 48.86
CDY09123 Canola plasma membrane 49.04 48.8
EES16682 Sorghum golgi, plasma membrane, plastid 50.0 48.6
Os12t0159600-01 Rice plastid 49.52 48.58
Os11t0157200-03 Rice plasma membrane 48.56 48.1
TraesCS5D01G133300.1 Wheat cytosol 48.08 48.08
Bra020177.1-P Field mustard plasma membrane 48.08 47.85
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 49.04 47.66
Zm00001d023468_P001 Maize extracellular 48.56 47.42
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 48.56 47.42
HORVU7Hr1G078320.1 Barley cytosol 49.04 47.22
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 48.56 47.2
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 48.08 47.17
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 50.0 47.06
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 48.56 46.76
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 47.6 46.48
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 47.6 46.48
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 48.08 46.3
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 48.08 46.3
EES08013 Sorghum golgi, plasma membrane, plastid 47.6 46.26
Zm00001d026664_P001 Maize extracellular 49.04 46.15
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 49.04 46.15
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 49.04 46.15
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 47.12 46.01
Os04t0685400-01 Rice golgi, plasma membrane, plastid 48.56 45.91
Zm00001d016733_P001 Maize extracellular, plasma membrane 41.35 45.74
Zm00001d052776_P001 Maize extracellular 46.63 45.54
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 48.08 45.45
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 46.15 44.86
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 20.67 44.79
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 45.19 43.72
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 45.19 43.72
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 47.6 43.61
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.23 42.79
EES06921 Sorghum endoplasmic reticulum 43.27 42.45
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 43.75 42.13
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 43.75 42.13
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 43.27 41.67
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 43.27 41.67
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.79 41.59
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.79 41.59
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.79 41.59
Os04t0416700-01 Rice golgi, plasma membrane 43.75 41.36
PGSC0003DMT400001571 Potato endoplasmic reticulum, nucleus, plasma membrane 42.31 41.31
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 44.23 41.26
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 42.79 41.2
EES12138 Sorghum extracellular, golgi, plasma membrane 42.79 40.27
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 42.79 39.73
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 42.79 39.56
HORVU2Hr1G040910.1 Barley peroxisome 45.19 39.5
HORVU5Hr1G040160.3 Barley golgi, peroxisome 50.0 38.1
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 40.38 37.5
PGSC0003DMT400029400 Potato cytosol, peroxisome, plastid, vacuole 27.4 25.0
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 23.56 24.62
Protein Annotations
EnsemblPlants:PGSC0003DMT400015090EnsemblPlantsGene:PGSC0003DMG400005898EntrezGene:102606257GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF2PFAM:PF03168PGSC:PGSC0003DMG400005898RefSeq:XP_006361098.1
SEG:segTMHMM:TMhelixUniParc:UPI0002959374UniProt:M1A5F5MapMan:35.1:
Description
Harpin-induced family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005898]
Coordinates
chr6:-:54640861..54641727
Molecular Weight (calculated)
23405.5 Da
IEP (calculated)
9.246
GRAVY (calculated)
0.089
Length
208 amino acids
Sequence
(BLAST)
001: MSAKDCGHHD EERHKLHRRL FAALVGFIIL VLFIILLIFL ILRPTKPHFI LQDATIYSFN ISSPNLLTTN FQITLASRNP NDKIGIYYDK LDVYATYRGQ
101: QITLPTLLPQ SYQGHKDFTI WSPFVYGNSV PVAPYLSESL SEDQMAGTVL INVKVDGRVR WKVGTFVSGK YHLNVNCPAY VGGKMIGNSI AVGSAMKYQL
201: VQNCHVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.