Factsheet for Zm00001d025371_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:

mitochondrion 2
golgi 3
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	92.41	92.0
EES12138	Sorghum	extracellular, golgi, plasma membrane	88.39	89.59
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	77.23	80.09
Os04t0416700-01	Rice	golgi, plasma membrane	78.57	80.0
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	76.79	79.63
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	76.79	79.63
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	76.79	79.63
Zm00001d016733_P001	Maize	extracellular, plasma membrane	54.91	65.43
Zm00001d023468_P001	Maize	extracellular	49.55	52.11
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	48.66	51.42
Zm00001d052776_P001	Maize	extracellular	46.88	49.3
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	20.09	46.88
Zm00001d026664_P001	Maize	extracellular	45.09	45.7
VIT_06s0080g01200.t01	Wine grape	plasma membrane	40.18	43.27
Bra002396.1-P	Field mustard	plasma membrane	39.73	43.0
GSMUA_Achr9P08960_001	Banana	plasma membrane	40.18	42.86
CDX98590	Canola	plasma membrane	39.29	42.51
CDX92375	Canola	plasma membrane	39.29	42.51
KRH26671	Soybean	plasma membrane	40.62	41.18
Solyc11g068890.1.1	Tomato	plasma membrane	38.39	41.15
CDY29084	Canola	mitochondrion	31.25	40.7
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	37.95	40.48
PGSC0003DMT400015090	Potato	plasma membrane	37.5	40.38
PGSC0003DMT400050538	Potato	plasma membrane	37.5	40.19
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	38.39	40.19
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	37.95	39.91
Solyc06g074040.1.1	Tomato	plasma membrane	37.05	39.9
CDY69513	Canola	plasma membrane	36.61	39.81
Bra035001.1-P	Field mustard	plasma membrane	36.61	39.81
CDY08687	Canola	plasma membrane	36.61	39.81
AT3G44220.1	Thale cress	plasma membrane	36.61	39.81
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	37.95	39.72
KRG96252	Soybean	plasma membrane	36.16	38.57
KRH22643	Soybean	plasma membrane	37.5	38.53
KRH32836	Soybean	plasma membrane	35.71	38.28
CDY35671	Canola	plasma membrane	35.71	38.28
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	35.27	38.16
CDY09123	Canola	plasma membrane	35.27	37.8
AT3G11660.1	Thale cress	plasma membrane	34.82	37.32
Bra020177.1-P	Field mustard	plasma membrane	34.82	37.32
KRH72197	Soybean	plasma membrane	34.38	37.2
AT5G06330.1	Thale cress	plasma membrane	34.38	37.2
CDX90600	Canola	plasma membrane	34.38	37.02
CDY72430	Canola	cytosol	33.93	36.54
Bra012801.1-P	Field mustard	plasma membrane	33.93	36.54
Bra006927.1-P	Field mustard	cytosol	33.93	36.54
CDY32068	Canola	plasma membrane	33.48	36.41
AT3G52470.1	Thale cress	extracellular, plasma membrane	33.48	36.06
CDY69198	Canola	cytosol	33.48	36.06
CDY68967	Canola	cytosol	33.48	36.06
Bra033428.1-P	Field mustard	cytosol	33.48	36.06
CDY40419	Canola	plasma membrane	33.04	35.58
Bra017276.1-P	Field mustard	plasma membrane	33.04	35.58
Bra038671.1-P	Field mustard	plasma membrane	33.48	35.55
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	32.59	34.6
CDY01043	Canola	mitochondrion	32.59	34.43
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	32.59	34.43
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	32.59	34.43
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	32.14	34.29
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	31.7	33.65
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	31.7	33.65
Bra005892.1-P	Field mustard	plasma membrane	31.7	33.33
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	31.25	33.18
CDX81001	Canola	plastid	31.7	33.02
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	30.8	32.7
KRH67997	Soybean	plastid	36.61	32.54
CDY55755	Canola	plasma membrane	30.8	32.39
AT5G05657.1	Thale cress	plastid	19.64	32.12
Zm00001d021289_P001	Maize	mitochondrion	28.57	29.22
CDX95339	Canola	plasma membrane	33.48	25.17
Zm00001d037915_P001	Maize	cytosol, peroxisome, plastid	25.89	22.14

Protein Annotations

EnsemblPlants:Zm00001d025371_P001	EnsemblPlants:Zm00001d025371_T001	EnsemblPlantsGene:Zm00001d025371	EntrezGene:103641626	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF12	PFAM:PF03168	ProteinID:AQK43621.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI000221F929	UniProt:K7TT65	MapMan:35.1	:

Description

NDR1/HIN1-like 1

Coordinates

chr10:-:115921553..115922847

Molecular Weight (calculated)

24044.0 Da

IEP (calculated)

8.702

GRAVY (calculated)

0.247

Length

224 amino acids

Sequence
(BLAST)

001: MSKEKHHRDW ILRRCCGSVA ACILTLAAVV GFIVLVIYLA LRPSKPSFYL QDVQLRSIDL SDPALSLDLQ VTIVSRNPNE RVGVYYKTLD AFTTYRDEAV
101: TVPVSMPAVY QGHRDASVWS PVMSGDAVPL PQYAADAMRQ DIAAGYVLLH VRVDGRVKWK VGSWVSGSYR LFVNCPALLA ASGSAGAGGA FAASAASLRS
201: GVPAGVNTTV SLKFTHPADC TVDV

Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)

001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV

Arabidopsis Description

NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.