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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G11660.1 Thale cress plasma membrane 88.15 89.0
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 88.63 88.21
Bra006927.1-P Field mustard cytosol 68.72 69.71
Bra012801.1-P Field mustard plasma membrane 68.25 69.23
Bra033428.1-P Field mustard cytosol 67.77 68.75
Bra017276.1-P Field mustard plasma membrane 64.45 65.38
KRH72197 Soybean plasma membrane 61.61 62.8
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 61.61 62.8
KRH32836 Soybean plasma membrane 62.09 62.68
KRG96252 Soybean plasma membrane 60.66 60.95
PGSC0003DMT400072342 Potato extracellular, plasma membrane 57.82 57.82
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 56.87 56.87
PGSC0003DMT400042351 Potato extracellular, plasma membrane 56.4 56.4
Bra035001.1-P Field mustard plasma membrane 53.55 54.85
Bra005892.1-P Field mustard plasma membrane 54.03 53.52
KRH67997 Soybean plastid 62.09 51.98
GSMUA_Achr9P08960_001 Banana plasma membrane 49.76 50.0
Bra002396.1-P Field mustard plasma membrane 45.97 46.86
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 45.97 45.33
GSMUA_Achr8P34450_001 Banana plasma membrane 44.55 44.98
Bra020177.1-P Field mustard plasma membrane 44.08 44.5
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 44.08 44.08
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 36.49 44.0
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 43.13 43.75
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 43.13 43.75
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 36.49 43.75
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 36.97 43.58
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 42.65 43.27
EES16682 Sorghum golgi, plasma membrane, plastid 43.6 42.99
TraesCS5D01G133300.1 Wheat cytosol 42.18 42.79
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 19.43 42.71
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 42.65 42.25
Os12t0159600-01 Rice plastid 42.18 41.98
GSMUA_Achr10P... Banana plasma membrane 41.71 41.71
HORVU7Hr1G078320.1 Barley cytosol 42.65 41.67
Os11t0157200-03 Rice plasma membrane 41.23 41.43
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 41.23 41.04
Zm00001d052776_P001 Maize extracellular 41.23 40.85
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 41.23 40.85
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 41.23 40.85
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 41.71 40.74
Zm00001d023468_P001 Maize extracellular 40.76 40.38
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 40.76 40.38
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 40.76 40.38
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 41.23 40.28
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 41.23 40.28
Zm00001d016733_P001 Maize extracellular, plasma membrane 35.55 39.89
EES08013 Sorghum golgi, plasma membrane, plastid 40.28 39.72
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 42.65 39.65
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 39.81 39.25
Os04t0685400-01 Rice golgi, plasma membrane, plastid 40.76 39.09
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 40.76 38.91
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 40.76 38.91
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 39.34 38.78
EES06921 Sorghum endoplasmic reticulum 38.86 38.68
EES13132 Sorghum cytosol 39.81 38.36
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 38.86 38.32
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 38.86 38.32
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 38.86 38.32
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 39.81 38.01
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 38.86 37.96
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 38.86 37.27
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 37.91 37.21
Zm00001d026664_P001 Maize extracellular 38.86 37.1
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 37.91 37.04
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 38.86 36.77
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.44 36.74
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 37.44 36.74
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 38.86 36.61
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 37.44 36.57
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 37.44 36.57
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 37.44 36.57
EES12138 Sorghum extracellular, golgi, plasma membrane 37.91 36.2
Bra022668.1-P Field mustard endoplasmic reticulum, nucleus, plasma membrane 36.49 36.15
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 38.39 36.0
Bra003039.1-P Field mustard plastid 36.02 35.68
Os04t0416700-01 Rice golgi, plasma membrane 36.97 35.45
HORVU5Hr1G040160.3 Barley golgi, peroxisome 43.6 33.7
HORVU2Hr1G040910.1 Barley peroxisome 37.91 33.61
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 35.55 33.48
Bra037412.1-P Field mustard cytosol, peroxisome, plasma membrane 29.86 27.27
Bra000927.1-P Field mustard cytosol, peroxisome, plasma membrane 28.91 26.64
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 24.17 25.63
Protein Annotations
EnsemblPlants:Bra038671.1EnsemblPlants:Bra038671.1-PEnsemblPlantsGene:Bra038671GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF2PFAM:PF03168SEG:segTMHMM:TMhelix
UniParc:UPI000254380EUniProt:M4FC55MapMan:35.1:::
Description
AT3G11660 (E=6e-090) NHL1 | NHL1
Coordinates
chrA01:+:26692417..26693052
Molecular Weight (calculated)
23727.7 Da
IEP (calculated)
9.999
GRAVY (calculated)
0.108
Length
211 amino acids
Sequence
(BLAST)
001: MTSKDCGSHT HSRRKLIRRI IWSIIFILFI IFLTILLIWA ILQPSKPRFI LQDATVYAFN VSGNPPNLLT SNFQITLSSR NPNDKIGIYY DRLDVYATYH
101: SQQITFRTSI PPTYQGHKEV NIWSPFVYGT SVPVAPFNAV SLDGDQDNGA VTLIIRADGR VRWKVGTFIT GKYHLYVRCL AYINFGNKAA GVIVGDNAVK
201: YTLTSSCSVS V
Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)
001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV
Arabidopsis Description
NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.