Factsheet for Zm00001d041927_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

golgi 1
mitochondrion 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
MultiLoc:	golgi
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d023468_P001	Maize	extracellular	86.79	86.39
Os12t0159600-01	Rice	plastid	82.55	82.55
Zm00001d052776_P001	Maize	extracellular	75.94	75.59
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	28.77	63.54
GSMUA_Achr9P08960_001	Banana	plasma membrane	55.66	56.19
Zm00001d016733_P001	Maize	extracellular, plasma membrane	47.17	53.19
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	52.83	49.78
Zm00001d026664_P001	Maize	extracellular	51.42	49.32
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	51.42	48.66
PGSC0003DMT400015090	Potato	plasma membrane	47.17	48.08
Solyc06g074040.1.1	Tomato	plasma membrane	46.7	47.6
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	47.64	47.2
PGSC0003DMT400050538	Potato	plasma membrane	46.23	46.89
CDY29084	Canola	mitochondrion	37.26	45.93
Bra002396.1-P	Field mustard	plasma membrane	44.81	45.89
Solyc11g068890.1.1	Tomato	plasma membrane	44.81	45.45
CDX98590	Canola	plasma membrane	43.87	44.93
CDX92375	Canola	plasma membrane	43.87	44.93
CDY69513	Canola	plasma membrane	43.4	44.66
Bra035001.1-P	Field mustard	plasma membrane	43.4	44.66
CDY08687	Canola	plasma membrane	43.4	44.66
AT5G06330.1	Thale cress	plasma membrane	43.4	44.44
CDX90600	Canola	plasma membrane	43.4	44.23
VIT_06s0080g01200.t01	Wine grape	plasma membrane	43.4	44.23
AT3G44220.1	Thale cress	plasma membrane	42.92	44.17
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	42.92	43.96
Bra012801.1-P	Field mustard	plasma membrane	42.92	43.75
Bra006927.1-P	Field mustard	cytosol	42.92	43.75
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.87	43.66
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.87	43.46
Bra033428.1-P	Field mustard	cytosol	42.45	43.27
AT3G52470.1	Thale cress	extracellular, plasma membrane	42.45	43.27
CDY72430	Canola	cytosol	42.45	43.27
CDY69198	Canola	cytosol	42.45	43.27
CDY68967	Canola	cytosol	41.98	42.79
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	41.98	42.38
KRG96252	Soybean	plasma membrane	41.98	42.38
AT3G11660.1	Thale cress	plasma membrane	41.51	42.11
KRH26671	Soybean	plasma membrane	43.87	42.08
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	41.98	41.98
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	41.51	41.9
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	41.51	41.51
CDY01043	Canola	mitochondrion	41.51	41.51
Bra038671.1-P	Field mustard	plasma membrane	41.04	41.23
CDY32068	Canola	plasma membrane	39.62	40.78
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	40.57	40.76
KRH32836	Soybean	plasma membrane	40.09	40.67
CDY40419	Canola	plasma membrane	39.62	40.38
Bra017276.1-P	Field mustard	plasma membrane	39.62	40.38
KRH22643	Soybean	plasma membrane	41.51	40.37
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	40.09	40.28
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	40.09	40.28
KRH72197	Soybean	plasma membrane	39.15	40.1
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	39.62	39.81
CDY09123	Canola	plasma membrane	39.15	39.71
CDY35671	Canola	plasma membrane	39.15	39.71
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	39.15	39.34
Bra020177.1-P	Field mustard	plasma membrane	38.21	38.76
CDY55755	Canola	plasma membrane	38.21	38.03
CDX81001	Canola	plastid	38.21	37.67
Bra005892.1-P	Field mustard	plasma membrane	37.74	37.56
KRH67997	Soybean	plastid	41.98	35.32
AT5G05657.1	Thale cress	plastid	22.64	35.04
CDX95339	Canola	plasma membrane	41.04	29.19
Zm00001d021289_P001	Maize	mitochondrion	27.83	26.94
Zm00001d037915_P001	Maize	cytosol, peroxisome, plastid	30.66	24.81

Protein Annotations

EMBL:BT035287	EnsemblPlants:Zm00001d041927_P001	EnsemblPlants:Zm00001d041927_T001	EnsemblPlantsGene:Zm00001d041927	EntrezGene:100193113	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF11	PFAM:PF03168
ProteinID:ONM34092.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00017B65F4	UniProt:B4FDU9	MapMan:35.1

Description

NDR1/HIN1-like 1

Coordinates

chr3:-:143910664..143911630

Molecular Weight (calculated)

23125.8 Da

IEP (calculated)

8.901

GRAVY (calculated)

0.086

Length

212 amino acids

Sequence
(BLAST)

001: MGKDCGKHGD DDLRRSCRRL LATIVVLALT VGVVALIVYL VLRPTHPRFY LQDASLRQLD LSNATTSTST LLSTAIQVTL ASRNPNERVG VYYDRLDVYA
101: SYKYQQLTVA ASLPPAYQGH GDVGVWSPVL AGPNVPLAPY LADALRQDCQ AGYLVLQVKV DGRVRWKVGS WVSNHYHLFV TCPAFLVTAG GNGAPGAAGF
201: RFQTTTYCHV EV

Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)

001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV

Arabidopsis Description

At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.