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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra005892.1-P Field mustard plasma membrane 98.59 98.59
CDX81001 Canola plastid 93.9 93.02
AT5G06330.1 Thale cress plasma membrane 53.05 54.59
CDY72430 Canola cytosol 51.64 52.88
CDX90600 Canola plasma membrane 51.17 52.4
CDY29084 Canola mitochondrion 42.25 52.33
CDY01043 Canola mitochondrion 51.64 51.89
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 51.64 51.89
CDY69198 Canola cytosol 49.77 50.96
CDY68967 Canola cytosol 49.77 50.96
CDY32068 Canola plasma membrane 48.36 50.0
KRG96252 Soybean plasma membrane 48.36 49.05
CDY40419 Canola plasma membrane 47.89 49.04
KRH32836 Soybean plasma membrane 46.48 47.37
KRH72197 Soybean plasma membrane 46.01 47.34
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 45.54 46.86
AT5G05657.1 Thale cress plastid 29.58 45.99
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 44.6 45.02
PGSC0003DMT400072342 Potato extracellular, plasma membrane 44.13 44.55
CDY08687 Canola plasma membrane 42.72 44.17
CDY69513 Canola plasma membrane 42.72 44.17
PGSC0003DMT400042351 Potato extracellular, plasma membrane 43.19 43.6
GSMUA_Achr9P08960_001 Banana plasma membrane 42.72 43.33
KRH67997 Soybean plastid 48.36 40.87
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 18.31 40.62
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 38.5 39.42
CDX98590 Canola plasma membrane 38.03 39.13
CDX92375 Canola plasma membrane 38.03 39.13
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 38.03 38.94
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 31.46 38.29
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 38.03 38.21
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 31.92 37.99
CDY35671 Canola plasma membrane 37.09 37.8
GSMUA_Achr8P34450_001 Banana plasma membrane 37.09 37.8
Os12t0159600-01 Rice plastid 37.56 37.74
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 37.56 37.38
EES16682 Sorghum golgi, plasma membrane, plastid 37.56 37.38
HORVU7Hr1G078320.1 Barley cytosol 37.56 37.04
TraesCS5D01G133300.1 Wheat cytosol 36.15 37.02
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 36.62 36.97
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 37.09 36.92
CDY09123 Canola plasma membrane 36.15 36.84
Zm00001d016733_P001 Maize extracellular, plasma membrane 32.39 36.7
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 37.09 36.57
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 36.62 36.45
Os11t0157200-03 Rice plasma membrane 35.68 36.19
Zm00001d023468_P001 Maize extracellular 36.15 36.15
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.62 36.11
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.62 36.11
EES06921 Sorghum endoplasmic reticulum 35.68 35.85
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 29.58 35.8
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 35.68 35.68
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 35.68 35.68
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 35.68 35.68
EES13132 Sorghum cytosol 36.62 35.62
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 34.74 35.58
CDX95339 Canola plasma membrane 49.77 35.57
GSMUA_Achr10P... Banana plasma membrane 35.21 35.55
EES08013 Sorghum golgi, plasma membrane, plastid 35.68 35.51
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 35.21 35.21
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 36.15 34.84
Zm00001d026664_P001 Maize extracellular 36.15 34.84
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 34.74 34.74
Zm00001d052776_P001 Maize extracellular 34.74 34.74
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 35.68 34.39
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 35.68 34.39
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 36.62 34.36
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 34.27 33.95
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 34.27 33.95
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 34.74 33.64
Os04t0685400-01 Rice golgi, plasma membrane, plastid 34.74 33.64
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 33.8 33.49
CDY28821 Canola endoplasmic reticulum, nucleus, plasma membrane 32.39 32.39
CDY51789 Canola endoplasmic reticulum, nucleus, plasma membrane 32.39 32.39
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 32.39 31.94
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.92 31.78
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.92 31.78
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 31.92 31.78
EES12138 Sorghum extracellular, golgi, plasma membrane 32.86 31.67
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 33.33 31.56
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 32.86 31.25
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 31.46 31.02
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 31.46 31.02
CDY20226 Canola endoplasmic reticulum, nucleus, plasma membrane 30.99 30.99
CDY14357 Canola plastid 30.99 30.99
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 32.39 30.94
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 32.39 30.8
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 30.99 30.56
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 30.99 30.56
HORVU2Hr1G040910.1 Barley peroxisome 33.8 30.25
Os04t0416700-01 Rice golgi, plasma membrane 30.99 30.0
HORVU5Hr1G040160.3 Barley golgi, peroxisome 37.56 29.3
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 21.13 22.61
CDX91852 Canola cytosol, peroxisome, plasma membrane 23.94 22.27
CDY51712 Canola cytosol, peroxisome, plasma membrane 23.94 22.08
CDX74380 Canola cytosol, peroxisome, plasma membrane 23.47 21.83
CDY07145 Canola cytosol, peroxisome, plasma membrane 23.47 21.55
Protein Annotations
EnsemblPlants:CDY55755EnsemblPlantsGene:GSBRNA2T00017318001GO:A0A078J1C2GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR31415PANTHER:PTHR31415:SF2ProteinID:CDY55755ProteinID:CDY55755.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EEA98EUniProt:A0A078J1C2MapMan:35.1:::
Description
BnaA03g55330DBnaA03g55330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1C2]
Coordinates
chrLK033427:-:2756..3397
Molecular Weight (calculated)
23124.3 Da
IEP (calculated)
9.773
GRAVY (calculated)
0.403
Length
213 amino acids
Sequence
(BLAST)
001: MPVKECGSHA SNSPRLLNFL RRNIICLVIF IIVTIIGIVL AWVILHSPKP RFILQDATVF YFNVSGDPPD LLTSSIQTTL ISRNLNGKTG INYDRLDVYA
101: SYQSQQITLP TSIPAAYQGY EEVNVWSPFI GGKYVPIARA NALSLVQEQS SGAVKVLVHV VGKISWKVGP ITRTSDLFVR CPALISFGNS AAGVIVGGRG
201: VKYTLVTVCS VSV
Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)
001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV
Arabidopsis Description
NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.