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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92375 Canola plasma membrane 97.58 97.58
Bra002396.1-P Field mustard plasma membrane 97.1 97.1
CDY09123 Canola plasma membrane 84.54 83.73
CDY35671 Canola plasma membrane 83.57 82.78
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 71.5 70.48
CDY69513 Canola plasma membrane 68.12 68.45
CDY08687 Canola plasma membrane 67.63 67.96
VIT_06s0080g01200.t01 Wine grape plasma membrane 51.69 51.44
PGSC0003DMT400015090 Potato plasma membrane 50.24 50.0
Solyc06g074040.1.1 Tomato plasma membrane 50.24 50.0
PGSC0003DMT400050538 Potato plasma membrane 48.31 47.85
CDX90600 Canola plasma membrane 47.34 47.12
CDY69198 Canola cytosol 47.34 47.12
CDY68967 Canola cytosol 47.34 47.12
CDY29084 Canola mitochondrion 39.13 47.09
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 48.31 46.95
Solyc11g068890.1.1 Tomato plasma membrane 47.34 46.89
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 21.74 46.88
CDY01043 Canola mitochondrion 47.83 46.7
CDY08506 Canola endoplasmic reticulum, mitochondrion, plasma membrane, plastid 47.83 46.7
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 47.83 46.26
Os11t0157200-03 Rice plasma membrane 46.86 46.19
CDY72430 Canola cytosol 46.38 46.15
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 38.65 45.71
KRH26671 Soybean plasma membrane 48.31 45.25
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 45.41 45.19
CDY40419 Canola plasma membrane 45.41 45.19
CDY32068 Canola plasma membrane 44.93 45.15
KRH22643 Soybean plasma membrane 47.34 44.95
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 38.16 44.89
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 44.93 44.71
Zm00001d016733_P001 Maize extracellular, plasma membrane 40.58 44.68
GSMUA_Achr9P08960_001 Banana plasma membrane 44.93 44.29
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 45.41 44.13
GSMUA_Achr10P... Banana plasma membrane 44.93 44.08
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 44.93 43.87
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 44.93 43.66
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 44.93 43.66
TraesCS5D01G133300.1 Wheat cytosol 43.48 43.27
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 44.44 43.19
EES16682 Sorghum golgi, plasma membrane, plastid 44.44 42.99
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 42.51 42.31
Zm00001d052776_P001 Maize extracellular 43.48 42.25
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 43.0 42.18
Os12t0159600-01 Rice plastid 43.0 41.98
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 43.48 41.86
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.48 41.86
Zm00001d023468_P001 Maize extracellular 43.0 41.78
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 43.0 41.78
EES06921 Sorghum endoplasmic reticulum 42.51 41.51
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.0 41.4
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 35.75 41.34
GSMUA_Achr8P34450_001 Banana plasma membrane 41.55 41.15
EES08013 Sorghum golgi, plasma membrane, plastid 42.51 41.12
EES12138 Sorghum extracellular, golgi, plasma membrane 43.48 40.72
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.03 40.65
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.03 40.65
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 42.03 40.65
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 41.55 39.81
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 41.55 39.81
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 41.06 39.72
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 41.06 39.35
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 41.06 39.35
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 41.06 39.35
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 42.51 39.29
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 42.51 39.11
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 42.03 38.84
HORVU2Hr1G040910.1 Barley peroxisome 44.44 38.66
Os04t0416700-01 Rice golgi, plasma membrane 41.06 38.64
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 41.06 38.46
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 41.06 38.46
HORVU7Hr1G078320.1 Barley cytosol 40.1 38.43
CDY55755 Canola plasma membrane 39.13 38.03
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 40.58 38.01
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 39.61 37.96
EES13132 Sorghum cytosol 40.1 37.9
Os04t0685400-01 Rice golgi, plasma membrane, plastid 40.1 37.73
CDX81001 Canola plastid 39.13 37.67
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 40.58 37.67
Zm00001d026664_P001 Maize extracellular 40.1 37.56
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 39.13 37.5
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 39.13 37.5
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 38.16 36.92
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 39.13 36.82
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 37.68 36.45
HORVU5Hr1G040160.3 Barley golgi, peroxisome 45.89 34.8
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 36.23 33.04
CDY20226 Canola endoplasmic reticulum, nucleus, plasma membrane 33.82 32.86
CDY14357 Canola plastid 33.33 32.39
CDY28821 Canola endoplasmic reticulum, nucleus, plasma membrane 33.33 32.39
CDY51789 Canola endoplasmic reticulum, nucleus, plasma membrane 33.33 32.39
CDX95339 Canola plasma membrane 45.41 31.54
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 24.15 25.13
CDX91852 Canola cytosol, peroxisome, plasma membrane 27.05 24.45
CDY51712 Canola cytosol, peroxisome, plasma membrane 27.05 24.24
CDY07145 Canola cytosol, peroxisome, plasma membrane 27.05 24.14
CDX74380 Canola cytosol, peroxisome, plasma membrane 26.57 24.02
Protein Annotations
EnsemblPlants:CDX98590EnsemblPlantsGene:GSBRNA2T00106270001GO:A0A078E949InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF17
PFAM:PF03168ProteinID:CDX98590ProteinID:CDX98590.1TMHMM:TMhelixUniParc:UPI0004EE17AFMapMan:35.1
Description
BnaC05g37850D
Coordinates
chrLK031905:-:1280735..1282411
Molecular Weight (calculated)
23130.1 Da
IEP (calculated)
7.335
GRAVY (calculated)
0.212
Length
207 amino acids
Sequence
(BLAST)
001: MTEKECKFEY RKYAEAATRR VVYGFIGLVA TVAVVIFFVW AILHPHKPRF VLQDVTIYEF NISQPNLLSS NLQVTLSSRN PNDKIGVFYD RLDIYASYRN
101: QEVTLANLLP ETYQGHLEVT VWSPVLIGSA VPVDPYLTPA LKEDINAGMV LLNIKIDGCV KWKVSSWVSG CYRLLVNCPA FIPFSGQVVG AGPAIKDQLA
201: QQCAVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.