Factsheet for TraesCS5B01G125000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, plasma membrane

Predictor Summary:

extracellular 2
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	extracellular
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	100.0	84.13
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	100.0	84.13
EES16682	Sorghum	golgi, plasma membrane, plastid	90.29	73.83
Os12t0159600-01	Rice	plastid	89.14	73.58
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	85.71	72.12
Zm00001d023468_P001	Maize	extracellular	86.29	70.89
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	81.14	66.67
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	98.29	63.0
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	33.71	61.46
GSMUA_Achr9P08960_001	Banana	plasma membrane	58.86	49.05
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	56.0	45.79
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	54.29	44.19
PGSC0003DMT400050538	Potato	plasma membrane	51.43	43.06
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	53.14	43.06
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	52.57	42.59
Solyc11g068890.1.1	Tomato	plasma membrane	50.29	42.11
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	53.14	42.08
CDY29084	Canola	mitochondrion	41.14	41.86
PGSC0003DMT400015090	Potato	plasma membrane	49.71	41.83
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	48.57	41.06
Bra035001.1-P	Field mustard	plasma membrane	48.0	40.78
CDY69513	Canola	plasma membrane	48.0	40.78
CDY08687	Canola	plasma membrane	48.0	40.78
Bra002396.1-P	Field mustard	plasma membrane	48.0	40.58
Solyc06g074040.1.1	Tomato	plasma membrane	48.0	40.38
VIT_06s0080g01200.t01	Wine grape	plasma membrane	47.43	39.9
AT3G44220.1	Thale cress	plasma membrane	46.29	39.32
CDX92375	Canola	plasma membrane	46.29	39.13
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	46.86	39.05
CDX98590	Canola	plasma membrane	45.71	38.65
KRG96252	Soybean	plasma membrane	46.29	38.57
CDX90600	Canola	plasma membrane	45.71	38.46
CDY72430	Canola	cytosol	45.14	37.98
Bra006927.1-P	Field mustard	cytosol	45.14	37.98
Bra012801.1-P	Field mustard	plasma membrane	45.14	37.98
AT3G11660.1	Thale cress	plasma membrane	45.14	37.8
CDY69198	Canola	cytosol	44.57	37.5
AT3G52470.1	Thale cress	extracellular, plasma membrane	44.57	37.5
Bra033428.1-P	Field mustard	cytosol	44.57	37.5
AT5G06330.1	Thale cress	plasma membrane	44.0	37.2
CDY68967	Canola	cytosol	44.0	37.02
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	44.57	36.97
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	44.57	36.97
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	44.57	36.97
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	44.0	36.67
Bra038671.1-P	Field mustard	plasma membrane	44.0	36.49
KRH32836	Soybean	plasma membrane	43.43	36.36
CDY35671	Canola	plasma membrane	43.43	36.36
CDY01043	Canola	mitochondrion	44.0	36.32
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	44.0	36.32
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	44.0	36.32
KRH72197	Soybean	plasma membrane	42.29	35.75
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	43.43	35.51
CDY09123	Canola	plasma membrane	41.71	34.93
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	42.29	34.74
Bra017276.1-P	Field mustard	plasma membrane	41.14	34.62
CDY40419	Canola	plasma membrane	41.14	34.62
CDY32068	Canola	plasma membrane	40.57	34.47
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	41.14	34.12
Bra020177.1-P	Field mustard	plasma membrane	40.57	33.97
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	40.57	33.65
KRH26671	Soybean	plasma membrane	42.29	33.48
KRH22643	Soybean	plasma membrane	41.14	33.03
KRH67997	Soybean	plastid	46.86	32.54
CDX81001	Canola	plastid	38.86	31.63
CDY55755	Canola	plasma membrane	38.29	31.46
Bra005892.1-P	Field mustard	plasma membrane	37.71	30.99
AT5G05657.1	Thale cress	plastid	21.14	27.01
TraesCS5B01G320400.1	Wheat	cytosol, plasma membrane, vacuole	34.29	26.67
CDX95339	Canola	plasma membrane	42.86	25.17
TraesCS6B01G383000.1	Wheat	endoplasmic reticulum	29.14	25.0
TraesCS5B01G103800.1	Wheat	cytosol	27.43	22.86
TraesCS1B01G245500.1	Wheat	cytosol	30.86	21.34

Protein Annotations

EnsemblPlants:TraesCS5B01G125000.1	EnsemblPlantsGene:TraesCS5B01G125000	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF11	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5B:+:227120980..227121606

Molecular Weight (calculated)

19095.0 Da

IEP (calculated)

7.895

GRAVY (calculated)

0.226

Length

175 amino acids

Sequence
(BLAST)

001: MGKDCGNHGD DHLRNGCRRL LAVLLVLAFI VAIITLIVYL VTVASRNPND RVGVYYDRLD VYASYKYQQI TVAASLPAVY QGHGDVDVWS PVLDGPNVPF
101: APYLASAISQ DCQAGYLILQ VKIDGRVRWK VGSWISGHYH LFVTCPAFLV TSGGNGAPGA SGFKFQTTTY CHVEV

Best Arabidopsis Sequence Match ( AT3G11660.1 )
(BLAST)

001: MKDCENHGHS RRKLIRRIFW SIIFVLFIIF LTILLIWAIL QPSKPRFILQ DATVYAFNVS GNPPNLLTSN FQITLSSRNP NNKIGIYYDR LDVYATYRSQ
101: QITFPTSIPP TYQGHKDVDI WSPFVYGTSV PIAPFNGVSL DTDKDNGVVL LIIRADGRVR WKVGTFITGK YHLHVKCPAY INFGNKANGV IVGDNAVKYT
201: FTTSCSVSV

Arabidopsis Description

NHL1NDR1/HIN1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SRN0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.