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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 2
  • plasma membrane 3
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plastid, secretory
BaCelLo:plastid
EpiLoc:extracellular
MultiLoc:plasma membrane
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400015090 Potato plasma membrane 97.12 97.12
Solyc11g068890.1.1 Tomato plasma membrane 74.52 74.16
VIT_06s0080g01200.t01 Wine grape plasma membrane 60.1 60.1
Bra035001.1-P Field mustard plasma membrane 59.13 59.71
CDY69513 Canola plasma membrane 59.13 59.71
AT3G44220.1 Thale cress plasma membrane 58.65 59.22
CDY08687 Canola plasma membrane 58.65 59.22
KRH25304 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 57.21 55.87
KRH26671 Soybean plasma membrane 58.17 54.75
KRH30370 Soybean endoplasmic reticulum, mitochondrion, plasma membrane, plastid 55.77 54.21
AT5G22200.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 53.37 52.86
GSMUA_Achr8P34450_001 Banana plasma membrane 52.4 52.15
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 52.88 52.13
KRH22643 Soybean plasma membrane 53.85 51.38
Bra002396.1-P Field mustard plasma membrane 50.96 51.21
GSMUA_Achr9P08960_001 Banana plasma membrane 51.44 50.95
CDX92375 Canola plasma membrane 50.48 50.72
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 42.79 50.57
CDX98590 Canola plasma membrane 50.0 50.24
CDY35671 Canola plasma membrane 50.48 50.24
GSMUA_Achr10P... Banana plasma membrane 50.96 50.24
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 50.0 49.29
CDY09123 Canola plasma membrane 49.04 48.8
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 41.83 48.6
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 48.56 48.56
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 49.52 48.36
EES16682 Sorghum golgi, plasma membrane, plastid 49.52 48.13
Os12t0159600-01 Rice plastid 49.04 48.11
Os11t0157200-03 Rice plasma membrane 48.56 48.1
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 48.08 48.08
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 48.08 48.08
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 40.38 48.0
Bra020177.1-P Field mustard plasma membrane 48.08 47.85
TraesCS5D01G133300.1 Wheat cytosol 47.6 47.6
EES13132 Sorghum cytosol 50.0 47.49
HORVU7Hr1G078320.1 Barley cytosol 49.04 47.22
Zm00001d023468_P001 Maize extracellular 48.08 46.95
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 48.56 46.76
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 48.08 46.73
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 48.08 46.73
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 47.6 46.7
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 49.52 46.61
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 47.6 46.48
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 48.08 46.3
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 48.08 46.3
EES08013 Sorghum golgi, plasma membrane, plastid 47.12 45.79
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 48.56 45.7
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 48.56 45.7
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 46.63 45.54
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 46.63 45.54
Zm00001d016733_P001 Maize extracellular, plasma membrane 40.87 45.21
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 46.15 45.07
Os04t0685400-01 Rice golgi, plasma membrane, plastid 47.6 45.0
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 47.6 45.0
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 46.15 44.86
Zm00001d026664_P001 Maize extracellular 47.6 44.8
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 20.67 44.79
Zm00001d052776_P001 Maize extracellular 45.67 44.6
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 47.12 43.17
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 44.23 42.79
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 44.23 42.79
EES06921 Sorghum endoplasmic reticulum 42.79 41.98
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.27 41.86
Solyc03g081230.1.1 Tomato endoplasmic reticulum, nucleus, plasma membrane 42.79 41.78
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 42.31 40.74
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 42.31 40.74
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 42.31 40.74
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.83 40.65
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.83 40.65
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 41.83 40.65
Os04t0416700-01 Rice golgi, plasma membrane 42.79 40.45
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 43.27 40.36
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 41.83 40.28
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 41.83 40.28
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 42.79 39.73
EES12138 Sorghum extracellular, golgi, plasma membrane 41.83 39.37
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 41.83 38.67
HORVU2Hr1G040910.1 Barley peroxisome 44.23 38.66
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 39.9 37.05
HORVU5Hr1G040160.3 Barley golgi, peroxisome 48.56 37.0
Solyc10g005040.2.1 Tomato cytosol, endoplasmic reticulum, plasma membrane 27.88 26.24
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 23.56 24.62
Protein Annotations
MapMan:35.1GO:GO:0003674GO:GO:0004871GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009506
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0046658UniProt:K4C9C2InterPro:LEA_2
PFAM:PF03168PANTHER:PTHR31415PANTHER:PTHR31415:SF2EnsemblPlantsGene:Solyc06g074040.1EnsemblPlants:Solyc06g074040.1.1TMHMM:TMhelix
UniParc:UPI000276619DSEG:seg::::
Description
No Description!
Coordinates
chr6:-:45773042..45773668
Molecular Weight (calculated)
23546.7 Da
IEP (calculated)
9.448
GRAVY (calculated)
0.060
Length
208 amino acids
Sequence
(BLAST)
001: MSAKDCGHHD EERHKLHRRL FTALVGFIIL ILFIILLIFL ILRPTKPHFI LQDATIYSFN ISSPNLLTTN FQITLASRNP NDKIGIYYDR LDVYATYRGQ
101: QITLPTLVPQ TYQGHKDFTI WSPFVYGNSV PVAPYLSESL REDQMAGTVL INVKVDGRVR WKVGTFVSGK YHLNVNCPAY VGGKMIGNSI AVGSAMKYQL
201: VQNCHVDV
Best Arabidopsis Sequence Match ( AT3G44220.1 )
(BLAST)
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.