Factsheet for TraesCS5A01G125600.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G133300.1	Wheat	cytosol	80.27	86.06
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	76.68	82.21
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	75.78	81.25
EES16682	Sorghum	golgi, plasma membrane, plastid	68.61	71.5
Os12t0159600-01	Rice	plastid	67.71	71.23
Zm00001d023468_P001	Maize	extracellular	66.82	69.95
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	64.13	67.14
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	76.23	62.27
GSMUA_Achr9P08960_001	Banana	plasma membrane	47.09	50.0
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	21.08	48.96
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	45.74	47.66
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	43.5	45.12
PGSC0003DMT400050538	Potato	plasma membrane	42.15	44.98
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	43.05	44.44
PGSC0003DMT400015090	Potato	plasma membrane	41.26	44.23
Solyc11g068890.1.1	Tomato	plasma membrane	41.26	44.02
Solyc06g074040.1.1	Tomato	plasma membrane	40.36	43.27
VIT_06s0080g01200.t01	Wine grape	plasma membrane	39.91	42.79
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.46	42.51
Bra002396.1-P	Field mustard	plasma membrane	39.46	42.51
CDY69513	Canola	plasma membrane	39.01	42.23
Bra035001.1-P	Field mustard	plasma membrane	39.01	42.23
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	41.7	42.08
CDY08687	Canola	plasma membrane	38.56	41.75
CDY29084	Canola	mitochondrion	31.84	41.28
CDX92375	Canola	plasma membrane	38.12	41.06
AT3G44220.1	Thale cress	plasma membrane	37.67	40.78
CDX98590	Canola	plasma membrane	37.67	40.58
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	38.12	40.48
Bra006927.1-P	Field mustard	cytosol	37.67	40.38
Bra012801.1-P	Field mustard	plasma membrane	37.67	40.38
CDY69198	Canola	cytosol	37.67	40.38
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	39.01	40.28
CDX90600	Canola	plasma membrane	37.22	39.9
CDY68967	Canola	cytosol	37.22	39.9
CDY72430	Canola	cytosol	37.22	39.9
AT3G11660.1	Thale cress	plasma membrane	37.22	39.71
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	37.22	39.52
Bra033428.1-P	Field mustard	cytosol	36.77	39.42
AT5G06330.1	Thale cress	plasma membrane	36.32	39.13
AT3G52470.1	Thale cress	extracellular, plasma membrane	36.32	38.94
Bra038671.1-P	Field mustard	plasma membrane	36.77	38.86
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	36.77	38.68
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	36.77	38.68
KRG96252	Soybean	plasma membrane	36.32	38.57
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	36.32	38.39
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	36.32	38.39
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	36.77	38.32
CDY01043	Canola	mitochondrion	36.32	38.21
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	36.32	38.03
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	35.87	37.91
CDY35671	Canola	plasma membrane	35.43	37.8
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	34.98	36.97
CDY32068	Canola	plasma membrane	34.08	36.89
KRH32836	Soybean	plasma membrane	34.53	36.84
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	34.53	36.49
Bra017276.1-P	Field mustard	plasma membrane	33.63	36.06
CDY40419	Canola	plasma membrane	33.63	36.06
CDY09123	Canola	plasma membrane	33.63	35.89
KRH72197	Soybean	plasma membrane	33.18	35.75
KRH22643	Soybean	plasma membrane	34.53	35.32
Bra020177.1-P	Field mustard	plasma membrane	32.74	34.93
KRH26671	Soybean	plasma membrane	34.53	34.84
AT5G05657.1	Thale cress	plastid	20.18	32.85
KRH67997	Soybean	plastid	36.77	32.54
CDY55755	Canola	plasma membrane	30.94	32.39
CDX81001	Canola	plastid	30.94	32.09
Bra005892.1-P	Field mustard	plasma membrane	30.49	31.92
CDX95339	Canola	plasma membrane	37.22	27.85
TraesCS5A01G320200.1	Wheat	cytosol, peroxisome, vacuole	27.35	27.11
TraesCS6A01G349800.1	Wheat	endoplasmic reticulum	23.32	25.49
TraesCS5A01G098600.1	Wheat	cytosol, endoplasmic reticulum, nucleus	23.32	24.76
TraesCS7A01G440300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	21.08	23.27
TraesCS1A01G232200.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	26.01	22.83

Protein Annotations

EnsemblPlants:TraesCS5A01G125600.1	EnsemblPlantsGene:TraesCS5A01G125600	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF11	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr5A:+:276111788..276112459

Molecular Weight (calculated)

24947.2 Da

IEP (calculated)

8.557

GRAVY (calculated)

0.090

Length

223 amino acids

Sequence
(BLAST)

001: MGKDCGNHHH DHFRNGCRRL LKVLLGLAFI VAVIALIVYL VLRPTHPGFF LQDASLRQLD LSNSSGLLST SLQITVASRN PNDRVGVYYD RLDVYASYKD
101: QQITVAASLP AVYQGHGDVD VWSPVLDGPN VPFAPYLASA ISQDCQAGHL VLHVKIDGRV RCKVGSWISG HYHLFVTCRV NYTIVPQLGP WWRIDTSFEK
201: FYMSVPCLDR TVANRAKLCI CTY

Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)

001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV

Arabidopsis Description

NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.