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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY55755 Canola plasma membrane 98.59 98.59
CDX81001 Canola plastid 93.43 92.56
AT5G06330.1 Thale cress plasma membrane 53.05 54.59
Bra038671.1-P Field mustard plasma membrane 53.52 54.03
Bra033428.1-P Field mustard cytosol 51.17 52.4
Bra012801.1-P Field mustard plasma membrane 50.7 51.92
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 51.64 51.89
Bra006927.1-P Field mustard cytosol 49.3 50.48
KRG96252 Soybean plasma membrane 47.89 48.57
Bra017276.1-P Field mustard plasma membrane 47.42 48.56
KRH32836 Soybean plasma membrane 46.01 46.89
KRH72197 Soybean plasma membrane 45.54 46.86
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 45.07 46.38
AT5G05657.1 Thale cress plastid 29.58 45.99
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 44.13 44.55
PGSC0003DMT400072342 Potato extracellular, plasma membrane 43.66 44.08
Bra035001.1-P Field mustard plasma membrane 42.25 43.69
GSMUA_Achr9P08960_001 Banana plasma membrane 42.72 43.33
PGSC0003DMT400042351 Potato extracellular, plasma membrane 42.72 43.13
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 18.31 40.62
KRH67997 Soybean plastid 47.89 40.48
Bra002396.1-P Field mustard plasma membrane 38.03 39.13
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 38.03 38.94
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 37.56 38.46
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 37.56 37.74
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 30.99 37.71
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 31.46 37.43
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 37.56 37.38
GSMUA_Achr8P34450_001 Banana plasma membrane 36.62 37.32
Os12t0159600-01 Rice plastid 37.09 37.26
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 36.62 36.97
EES16682 Sorghum golgi, plasma membrane, plastid 37.09 36.92
Bra020177.1-P Field mustard plasma membrane 36.15 36.84
Zm00001d016733_P001 Maize extracellular, plasma membrane 32.39 36.7
HORVU7Hr1G078320.1 Barley cytosol 37.09 36.57
TraesCS5D01G133300.1 Wheat cytosol 35.68 36.54
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 36.62 36.45
EES06921 Sorghum endoplasmic reticulum 36.15 36.32
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.62 36.11
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 36.15 35.98
Os11t0157200-03 Rice plasma membrane 35.21 35.71
Zm00001d023468_P001 Maize extracellular 35.68 35.68
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.15 35.65
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 36.15 35.65
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 29.11 35.23
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 35.21 35.21
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 35.21 35.21
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 35.21 35.21
EES13132 Sorghum cytosol 36.15 35.16
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 34.27 35.1
GSMUA_Achr10P... Banana plasma membrane 34.74 35.07
EES08013 Sorghum golgi, plasma membrane, plastid 35.21 35.05
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 35.21 34.88
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 35.21 34.88
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 34.74 34.74
Zm00001d026664_P001 Maize extracellular 35.68 34.39
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 35.68 34.39
Zm00001d052776_P001 Maize extracellular 34.27 34.27
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 34.27 34.27
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 34.27 33.95
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 35.21 33.94
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 35.21 33.94
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 36.15 33.92
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 34.27 33.18
Os04t0685400-01 Rice golgi, plasma membrane, plastid 34.27 33.18
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 33.33 32.87
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.86 32.71
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.86 32.71
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 32.86 32.71
EES12138 Sorghum extracellular, golgi, plasma membrane 33.8 32.58
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 34.27 32.44
Bra022668.1-P Field mustard endoplasmic reticulum, nucleus, plasma membrane 32.39 32.39
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 33.8 32.14
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 32.39 31.94
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 32.39 31.94
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 33.33 31.7
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 31.92 31.48
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 31.92 31.48
HORVU2Hr1G040910.1 Barley peroxisome 34.74 31.09
Bra003039.1-P Field mustard plastid 30.99 30.99
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 31.92 30.49
Os04t0416700-01 Rice golgi, plasma membrane 31.46 30.45
HORVU5Hr1G040160.3 Barley golgi, peroxisome 37.09 28.94
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 21.13 22.61
Bra037412.1-P Field mustard cytosol, peroxisome, plasma membrane 23.47 21.64
Bra000927.1-P Field mustard cytosol, peroxisome, plasma membrane 23.0 21.4
Protein Annotations
EnsemblPlants:Bra005892.1EnsemblPlants:Bra005892.1-PEnsemblPlantsGene:Bra005892GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR31415PANTHER:PTHR31415:SF2SEG:segTMHMM:TMhelixUniParc:UPI000253F5EAUniProt:M4CNV4
MapMan:35.1:::::
Description
AT3G11660 (E=5e-055) NHL1 | NHL1
Coordinates
chrA03:-:1086892..1087533
Molecular Weight (calculated)
22921.0 Da
IEP (calculated)
9.645
GRAVY (calculated)
0.414
Length
213 amino acids
Sequence
(BLAST)
001: MPVKECGSHA SNSPRLLNFL GRNIICLVIF IIVTIIGIAL AWVILHSPKP RFILQDATVF SFNVSGDPPD LLTSSIQTTL ISRNLNGKTG INYDRLDVYA
101: SYQSQQITLP TSIPAAYQGY EEVNVWSPFI GGKYVPIARA NALSLVQEQS SGAVKVLVHV VGKISWKVGP ITRTSDLFVR CPALISFGNS AAGVIVGGRG
201: VKYTLVTVCS VSV
Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)
001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV
Arabidopsis Description
NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.