Factsheet for TraesCS2B01G313900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

mitochondrion 1
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	100.0	100.0
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	99.54	99.54
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	96.76	96.76
Os04t0416700-01	Rice	golgi, plasma membrane	84.26	82.73
EES12138	Sorghum	extracellular, golgi, plasma membrane	84.26	82.35
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	82.87	79.56
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	79.63	76.79
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	65.74	66.36
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	65.28	65.58
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	42.59	52.57
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	23.15	52.08
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	48.61	49.3
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	45.37	47.12
VIT_06s0080g01200.t01	Wine grape	plasma membrane	44.44	46.15
GSMUA_Achr9P08960_001	Banana	plasma membrane	43.98	45.24
PGSC0003DMT400015090	Potato	plasma membrane	41.67	43.27
KRH25304	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	42.13	42.72
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	43.52	42.53
KRH30370	Soybean	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	41.67	42.06
Bra002396.1-P	Field mustard	plasma membrane	40.28	42.03
AT5G22200.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	40.74	41.9
Solyc06g074040.1.1	Tomato	plasma membrane	40.28	41.83
PGSC0003DMT400050538	Potato	plasma membrane	40.28	41.63
CDX92375	Canola	plasma membrane	39.81	41.55
CDY29084	Canola	mitochondrion	32.87	41.28
KRH26671	Soybean	plasma membrane	42.13	41.18
Solyc11g068890.1.1	Tomato	plasma membrane	39.81	41.15
CDX98590	Canola	plasma membrane	39.35	41.06
CDY69513	Canola	plasma membrane	38.89	40.78
Bra035001.1-P	Field mustard	plasma membrane	38.89	40.78
CDY08687	Canola	plasma membrane	38.89	40.78
AT3G44220.1	Thale cress	plasma membrane	38.43	40.29
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	40.28	40.28
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	37.96	39.61
KRG96252	Soybean	plasma membrane	38.43	39.52
CDY09123	Canola	plasma membrane	37.5	38.76
AT5G06330.1	Thale cress	plasma membrane	36.57	38.16
CDX90600	Canola	plasma membrane	36.57	37.98
CDY35671	Canola	plasma membrane	36.57	37.8
AT3G11660.1	Thale cress	plasma membrane	36.57	37.8
Bra020177.1-P	Field mustard	plasma membrane	36.57	37.8
KRH22643	Soybean	plasma membrane	37.96	37.61
Bra006927.1-P	Field mustard	cytosol	36.11	37.5
Bra012801.1-P	Field mustard	plasma membrane	36.11	37.5
CDY72430	Canola	cytosol	36.11	37.5
Bra038671.1-P	Field mustard	plasma membrane	36.57	37.44
CDY32068	Canola	plasma membrane	35.65	37.38
KRH32836	Soybean	plasma membrane	36.11	37.32
Bra033428.1-P	Field mustard	cytosol	35.65	37.02
AT3G52470.1	Thale cress	extracellular, plasma membrane	35.65	37.02
CDY69198	Canola	cytosol	35.65	37.02
CDY68967	Canola	cytosol	35.65	37.02
KRH72197	Soybean	plasma membrane	35.19	36.72
Bra017276.1-P	Field mustard	plasma membrane	35.19	36.54
CDY40419	Canola	plasma membrane	35.19	36.54
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	34.72	35.71
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	34.26	35.07
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	34.26	35.07
Bra034822.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, plastid	34.26	34.91
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	34.26	34.91
CDY01043	Canola	mitochondrion	34.26	34.91
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	33.33	34.12
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	32.41	33.18
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	32.41	33.18
AT5G05657.1	Thale cress	plastid	20.83	32.85
KRH67997	Soybean	plastid	37.5	32.14
CDX81001	Canola	plastid	31.94	32.09
Bra005892.1-P	Field mustard	plasma membrane	31.48	31.92
CDY55755	Canola	plasma membrane	30.56	30.99
TraesCS5B01G320400.1	Wheat	cytosol, plasma membrane, vacuole	30.09	28.89
CDX95339	Canola	plasma membrane	35.65	25.84
TraesCS1B01G245500.1	Wheat	cytosol	28.7	24.51
TraesCS6B01G383000.1	Wheat	endoplasmic reticulum	19.91	21.08
TraesCS5B01G103800.1	Wheat	cytosol	18.98	19.52

Protein Annotations

EnsemblPlants:TraesCS2B01G313900.1	EnsemblPlantsGene:TraesCS2B01G313900	InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF12	PFAM:PF03168
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2B:-:449120018..449121004

Molecular Weight (calculated)

23255.2 Da

IEP (calculated)

8.689

GRAVY (calculated)

0.288

Length

216 amino acids

Sequence
(BLAST)

001: MSKGKVHHDW ILRRCCGSIA ACILTLAVLV GFVALVIYLA LHPSKPSFYL QDIQLRSIDL ADPALSLDVQ VTIASRNPND RVGIYYKTLH AFTTYRDEPV
101: TVPVSLPAIY QGHKDQSVWS PVMSGDSVPV APYVADAMKQ DIAAGYVLLH VKVDGRVKWK VGSWVSGGYH IFVNCPALLS ASGGSVGGAF AMSATVGGKQ
201: TVSLKFTQPS YCTVDV

Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)

001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV

Arabidopsis Description

NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.