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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • plasma membrane 4
  • extracellular 2
  • cytosol 2
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:cytosol, extracellular, mitochondrion, plasma membrane, plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90600 Canola plasma membrane 99.52 99.52
Bra033428.1-P Field mustard cytosol 96.15 96.15
Bra006927.1-P Field mustard cytosol 95.67 95.67
AT3G52470.1 Thale cress extracellular, plasma membrane 88.94 88.94
Bra017276.1-P Field mustard plasma membrane 76.44 76.44
Bra038671.1-P Field mustard plasma membrane 69.23 68.25
Bra034822.1-P Field mustard extracellular, mitochondrion, plasma membrane, plastid 67.31 66.04
KRH72197 Soybean plasma membrane 56.25 56.52
KRH32836 Soybean plasma membrane 56.73 56.46
Solyc01g007220.2.1 Tomato extracellular, plasma membrane 56.73 55.92
VIT_08s0007g02350.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.29 55.56
Bra035001.1-P Field mustard plasma membrane 54.33 54.85
KRG96252 Soybean plasma membrane 55.29 54.76
PGSC0003DMT400042351 Potato extracellular, plasma membrane 54.33 53.55
PGSC0003DMT400072342 Potato extracellular, plasma membrane 52.88 52.13
Bra005892.1-P Field mustard plasma membrane 51.92 50.7
GSMUA_Achr9P08960_001 Banana plasma membrane 48.56 48.1
GSMUA_Achr10P... Banana plasma membrane 48.08 47.39
Bra002396.1-P Field mustard plasma membrane 46.63 46.86
TraesCS5D01G133400.1 Wheat golgi, plasma membrane, plastid 46.63 46.63
TraesCS5A01G125800.1 Wheat golgi, plasma membrane, plastid 46.63 46.63
Os11t0157200-03 Rice plasma membrane 46.63 46.19
GSMUA_Achr8P34450_001 Banana plasma membrane 46.15 45.93
GSMUA_AchrUn_... Banana cytosol, plasma membrane, plastid 47.12 45.79
KRH67997 Soybean plastid 54.81 45.24
TraesCS5B01G125000.1 Wheat cytosol, extracellular, plasma membrane 37.98 45.14
Zm00001d052776_P001 Maize extracellular 46.15 45.07
TraesCS4B01G115700.1 Wheat peroxisome, plasma membrane, plastid 46.15 45.07
HORVU4Hr1G021190.1 Barley golgi, plasma membrane, plastid 46.15 45.07
GSMUA_Achr11P... Banana cytosol, extracellular, mitochondrion, peroxisome 38.46 44.69
TraesCS4A01G199700.1 Wheat golgi, plasma membrane, plastid 45.67 44.6
TraesCS4D01G113300.1 Wheat peroxisome, plasma membrane, plastid 45.67 44.6
Bra020177.1-P Field mustard plasma membrane 44.71 44.5
EES16682 Sorghum golgi, plasma membrane, plastid 45.67 44.39
GSMUA_Achr7P03290_001 Banana endoplasmic reticulum, mitochondrion, plasma membrane, plastid 45.19 44.13
Os12t0159600-01 Rice plastid 44.71 43.87
GSMUA_Achr9P29670_001 Banana cytosol, extracellular, mitochondrion, plasma membrane 37.02 43.75
GSMUA_Achr6P19500_001 Banana endoplasmic reticulum, plasma membrane 44.23 43.6
TraesCS5B01G124900.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 43.27 43.27
Zm00001d023468_P001 Maize extracellular 44.23 43.19
Zm00001d041927_P001 Maize endoplasmic reticulum, golgi, plasma membrane 43.75 42.92
TraesCS5D01G133300.1 Wheat cytosol 42.79 42.79
HORVU7Hr1G078320.1 Barley cytosol 44.23 42.59
TraesCS7B01G227800.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 44.23 42.59
TraesCS7A01G327200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.75 42.13
TraesCS7D01G323900.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 43.75 42.13
EES08013 Sorghum golgi, plasma membrane, plastid 42.79 41.59
Zm00001d016733_P001 Maize extracellular, plasma membrane 37.02 40.96
Zm00001d034977_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 41.83 40.65
EES13132 Sorghum cytosol 42.79 40.64
Os04t0685400-01 Rice golgi, plasma membrane, plastid 42.79 40.45
Zm00001d026664_P001 Maize extracellular 42.79 40.27
GSMUA_Achr6P35580_001 Banana cytosol, extracellular, plastid 18.27 39.58
EES14353 Sorghum cytosol, mitochondrion, peroxisome, plasma membrane 40.38 39.25
TraesCS2D01G596200.1 Wheat cytosol, golgi, plasma membrane 40.87 38.46
EES06921 Sorghum endoplasmic reticulum 38.94 38.21
TraesCS2A01G583600.1 Wheat cytosol, golgi, plasma membrane 40.38 38.01
TraesCS2B01G603000.1 Wheat cytosol, golgi, plasma membrane 40.38 38.01
TraesCS5A01G125600.1 Wheat cytosol, peroxisome, plasma membrane 40.38 37.67
Os08t0102700-01 Rice cytosol, peroxisome, plasma membrane 40.87 37.44
TraesCS2D01G210700.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 38.46 37.21
TraesCS2A01G205300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 38.46 37.21
TraesCS2B01G232700.1 Wheat endoplasmic reticulum, golgi, plasma membrane 38.46 37.21
HORVU2Hr1G123370.1 Barley cytosol, golgi, plasma membrane 38.94 36.82
HORVU2Hr1G073830.1 Barley extracellular, plasma membrane 37.98 36.57
TraesCS2D01G295700.1 Wheat extracellular, plasma membrane 37.5 36.11
TraesCS2B01G313900.1 Wheat extracellular, plasma membrane 37.5 36.11
TraesCS2A01G297700.1 Wheat extracellular, plasma membrane 37.5 36.11
Zm00001d003751_P001 Maize extracellular, golgi, plasma membrane 38.94 36.0
TraesCS5A01G484900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.02 35.98
TraesCS5B01G498200.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.02 35.98
TraesCS5D01G498400.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 37.02 35.98
HORVU5Hr1G040160.3 Barley golgi, peroxisome 47.12 35.9
EES12138 Sorghum extracellular, golgi, plasma membrane 37.5 35.29
Os04t0416700-01 Rice golgi, plasma membrane 37.02 35.0
Os02t0538700-01 Rice cytosol, endoplasmic reticulum, plasma membrane 37.5 34.82
HORVU5Hr1G114220.1 Barley endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 36.06 34.72
Zm00001d025371_P001 Maize extracellular, golgi, plasma membrane 36.54 33.93
Bra003039.1-P Field mustard plastid 34.62 33.8
HORVU2Hr1G040910.1 Barley peroxisome 38.46 33.61
Bra022668.1-P Field mustard endoplasmic reticulum, nucleus, plasma membrane 34.13 33.33
Bra037412.1-P Field mustard cytosol, peroxisome, plasma membrane 26.92 24.24
HORVU2Hr1G066420.1 Barley mitochondrion, plastid 23.08 24.12
Bra000927.1-P Field mustard cytosol, peroxisome, plasma membrane 25.96 23.58
Protein Annotations
EnsemblPlants:Bra012801.1EnsemblPlants:Bra012801.1-PEnsemblPlantsGene:Bra012801GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LEA_2PANTHER:PTHR31415PANTHER:PTHR31415:SF2PFAM:PF03168SEG:segTMHMM:TMhelix
UniParc:UPI00025407C8UniProt:M4D8J1MapMan:35.1:::
Description
AT3G52470 (E=2e-092) | harpin-induced family protein / HIN1 family protein / harpin-responsive family protein
Coordinates
chrA03:+:22155849..22156475
Molecular Weight (calculated)
23029.2 Da
IEP (calculated)
10.247
GRAVY (calculated)
0.152
Length
208 amino acids
Sequence
(BLAST)
001: MSKDCGNHGG GKEAAVRRIC AAVIAFIIIV LITIFLVWVI LRPTKPRFIL QDATVFAFNL SQPNLLTTNF QITFASRNPN SKIGIYYDRL HVYATYRNQQ
101: ITLRTAIPPT YQGHKEDNVW SPFVYGTAVP IAPYNSVALG DEQGRGFVGL MIRADGRVRW KVGTLITGKY HIHVRCPAYI NLGNKAAGVL VGDSAVKYTL
201: VTKCSVNV
Best Arabidopsis Sequence Match ( AT3G52470.1 )
(BLAST)
001: MSKDCGNHGG GKEVVVRKLC AAIIAFIVIV LITIFLVWVI LRPTKPRFVL QDATVYAFNL SQPNLLTSNF QVTIASRNPN SKIGIYYDRL HVYATYMNQQ
101: ITLRTAIPPT YQGHKEVNVW SPFVYGTAVP IAPYNSVALG EEKDRGFVGL MIRADGTVRW KVRTLITGKY HIHVRCQAFI NLGNKAAGVL VGDNAVKYTL
201: ANKCSVNV
Arabidopsis Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SVC8]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.