Subcellular Localization
min:
: max
Winner_takes_all: plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- plastid 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P35580_001 | Banana | cytosol, extracellular, plastid | 22.61 | 46.88 |
| HORVU4Hr1G021190.1 | Barley | golgi, plasma membrane, plastid | 40.2 | 37.56 |
| HORVU5Hr1G114220.1 | Barley | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 32.16 | 29.63 |
| GSMUA_Achr9P08960_001 | Banana | plasma membrane | 31.16 | 29.52 |
| HORVU7Hr1G078320.1 | Barley | cytosol | 30.65 | 28.24 |
| CDY29084 | Canola | mitochondrion | 23.62 | 27.33 |
| HORVU2Hr1G073830.1 | Barley | extracellular, plasma membrane | 29.65 | 27.31 |
| HORVU2Hr1G123370.1 | Barley | cytosol, golgi, plasma membrane | 29.15 | 26.36 |
| CDY69513 | Canola | plasma membrane | 27.14 | 26.21 |
| CDY08687 | Canola | plasma membrane | 27.14 | 26.21 |
| Bra035001.1-P | Field mustard | plasma membrane | 27.14 | 26.21 |
| VIT_08s0007g02350.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 27.14 | 26.09 |
| AT5G06330.1 | Thale cress | plasma membrane | 27.14 | 26.09 |
| HORVU2Hr1G040910.1 | Barley | peroxisome | 31.16 | 26.05 |
| HORVU5Hr1G040160.3 | Barley | golgi, peroxisome | 35.68 | 26.01 |
| VIT_06s0080g01200.t01 | Wine grape | plasma membrane | 26.63 | 25.48 |
| PGSC0003DMT400050538 | Potato | plasma membrane | 26.63 | 25.36 |
| KRH32836 | Soybean | plasma membrane | 26.13 | 24.88 |
| AT3G44220.1 | Thale cress | plasma membrane | 25.63 | 24.76 |
| Bra002396.1-P | Field mustard | plasma membrane | 25.63 | 24.64 |
| Bra034822.1-P | Field mustard | extracellular, mitochondrion, plasma membrane, plastid | 26.13 | 24.53 |
| AT2G35960.1 | Thale cress | endoplasmic reticulum, golgi, plasma membrane | 25.63 | 24.29 |
| AT5G22200.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 25.63 | 24.29 |
| Solyc01g007220.2.1 | Tomato | extracellular, plasma membrane | 25.63 | 24.17 |
| PGSC0003DMT400042351 | Potato | extracellular, plasma membrane | 25.63 | 24.17 |
| Bra038671.1-P | Field mustard | plasma membrane | 25.63 | 24.17 |
| CDX92375 | Canola | plasma membrane | 25.13 | 24.15 |
| CDX98590 | Canola | plasma membrane | 25.13 | 24.15 |
| KRH72197 | Soybean | plasma membrane | 25.13 | 24.15 |
| CDY08506 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.63 | 24.06 |
| AT3G52470.1 | Thale cress | extracellular, plasma membrane | 25.13 | 24.04 |
| KRH25304 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.63 | 23.94 |
| Solyc11g068890.1.1 | Tomato | plasma membrane | 25.13 | 23.92 |
| AT3G11660.1 | Thale cress | plasma membrane | 25.13 | 23.92 |
| KRH30370 | Soybean | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.63 | 23.83 |
| KRG96252 | Soybean | plasma membrane | 25.13 | 23.81 |
| CDY01043 | Canola | mitochondrion | 25.13 | 23.58 |
| CDY72430 | Canola | cytosol | 24.62 | 23.56 |
| Solyc06g074040.1.1 | Tomato | plasma membrane | 24.62 | 23.56 |
| PGSC0003DMT400015090 | Potato | plasma membrane | 24.62 | 23.56 |
| CDX90600 | Canola | plasma membrane | 24.62 | 23.56 |
| CDY32068 | Canola | plasma membrane | 24.12 | 23.3 |
| PGSC0003DMT400072342 | Potato | extracellular, plasma membrane | 24.62 | 23.22 |
| Bra017276.1-P | Field mustard | plasma membrane | 24.12 | 23.08 |
| CDY40419 | Canola | plasma membrane | 24.12 | 23.08 |
| Bra033428.1-P | Field mustard | cytosol | 24.12 | 23.08 |
| Bra012801.1-P | Field mustard | plasma membrane | 24.12 | 23.08 |
| CDY09123 | Canola | plasma membrane | 24.12 | 22.97 |
| AT4G09590.1 | Thale cress | cytosol, plasma membrane, vacuole | 24.12 | 22.75 |
| CDY68967 | Canola | cytosol | 23.62 | 22.6 |
| Bra006927.1-P | Field mustard | cytosol | 23.62 | 22.6 |
| CDY69198 | Canola | cytosol | 23.62 | 22.6 |
| CDY35671 | Canola | plasma membrane | 23.62 | 22.49 |
| AT2G35970.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 23.62 | 22.27 |
| Bra020177.1-P | Field mustard | plasma membrane | 23.12 | 22.01 |
| AT5G05657.1 | Thale cress | plastid | 14.57 | 21.17 |
| CDY55755 | Canola | plasma membrane | 22.61 | 21.13 |
| Bra005892.1-P | Field mustard | plasma membrane | 22.61 | 21.13 |
| KRH26671 | Soybean | plasma membrane | 23.12 | 20.81 |
| CDX81001 | Canola | plastid | 21.61 | 20.0 |
| KRH67997 | Soybean | plastid | 25.13 | 19.84 |
| KRH22643 | Soybean | plasma membrane | 21.11 | 19.27 |
| HORVU1Hr1G058400.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 22.11 | 16.79 |
| CDX95339 | Canola | plasma membrane | 24.62 | 16.44 |
| HORVU5Hr1G081610.1 | Barley | golgi, nucleus, plastid | 21.61 | 16.35 |
| HORVU6Hr1G083970.1 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 16.08 | 15.69 |
| HORVU5Hr1G026690.1 | Barley | nucleus | 15.08 | 14.42 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G066420.1 | EnsemblPlantsGene:HORVU2Hr1G066420 | PANTHER:PTHR31415 | PANTHER:PTHR31415:SF11 | SEG:seg | UniParc:UPI000B46F865 |
| UniProt:A0A287I9D3 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:459084214..459084812
Molecular Weight (calculated)
21228.8 Da
IEP (calculated)
10.432
GRAVY (calculated)
-0.096
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVHLCCLMK TLVGRSMPSH ASGCASVTAL RAGCSEMRLG APPVCEEGEW LCQSLRGREP TRPAAGRLLA GTVTSAAGVE RLCRRRRALY RAPGHRRLRV
101: PVVYQGHGDV EVWSPVLSGP SVPFAPNLAD ALAKDVQAGY LILQVKIDGH ARWKVGSWIS GHYHIFVTCH AFLIGAGATA RRGPTGSGSR PPPTDTSRS
101: PVVYQGHGDV EVWSPVLSGP SVPFAPNLAD ALAKDVQAGY LILQVKIDGH ARWKVGSWIS GHYHIFVTCH AFLIGAGATA RRGPTGSGSR PPPTDTSRS
001: MTEKECEHHH DEDEKMRKRI GALVLGFLAA VLFVVFLVWA ILHPHGPRFV LQDATIYAFN VSQPNYLTSN LQVTLSSRNP NDKIGIFYDR LDIYASYRNQ
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
101: QVTLATLLPA TYQGHLDVTI WSPFLYGTTV PVAPYFSPAL SQDLTAGMVL LNIKIDGWVR WKVGTWVSGR YRLHVNCPAY ITLAGHFSGD GPAVKYQLVQ
201: RCAVDV
Arabidopsis Description
At3g44220 [Source:UniProtKB/TrEMBL;Acc:Q9LXM6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.