Subcellular Localization
min:
: max
Winner_takes_all: golgi, plastid, nucleus
Predictor Summary:
Predictor Summary:
- golgi 1
- plastid 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G320400.1 | Wheat | cytosol, plasma membrane, vacuole | 80.23 | 93.78 |
| TraesCS5D01G326100.1 | Wheat | cytosol, plasma membrane, vacuole | 77.95 | 91.52 |
| TraesCS5A01G320200.1 | Wheat | cytosol, peroxisome, vacuole | 77.57 | 90.67 |
| Os09t0532200-00 | Rice | plastid | 51.71 | 62.39 |
| Zm00001d021289_P001 | Maize | mitochondrion | 50.57 | 60.73 |
| EER99240 | Sorghum | golgi | 46.39 | 55.71 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 34.6 | 45.27 |
| KRH68967 | Soybean | extracellular, plasma membrane | 29.28 | 39.09 |
| KRG97253 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 28.14 | 37.56 |
| VIT_15s0048g02530.t01 | Wine grape | plasma membrane | 28.52 | 37.13 |
| HORVU1Hr1G058400.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 34.98 | 35.11 |
| Solyc10g005040.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 29.28 | 34.84 |
| PGSC0003DMT400029400 | Potato | cytosol, peroxisome, plastid, vacuole | 29.66 | 34.21 |
| HORVU5Hr1G114220.1 | Barley | endoplasmic reticulum, extracellular, mitochondrion, plasma membrane | 27.76 | 33.8 |
| AT4G01410.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 28.52 | 33.04 |
| HORVU7Hr1G078320.1 | Barley | cytosol | 26.62 | 32.41 |
| HORVU4Hr1G021190.1 | Barley | golgi, plasma membrane, plastid | 26.24 | 32.39 |
| CDX91852 | Canola | cytosol, peroxisome, plasma membrane | 28.14 | 32.31 |
| Bra000927.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 27.76 | 31.88 |
| CDX74380 | Canola | cytosol, peroxisome, plasma membrane | 27.76 | 31.88 |
| CDY51712 | Canola | cytosol, peroxisome, plasma membrane | 27.76 | 31.6 |
| Bra037412.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 27.76 | 31.6 |
| CDY07145 | Canola | cytosol, peroxisome, plasma membrane | 27.76 | 31.47 |
| HORVU2Hr1G040910.1 | Barley | peroxisome | 27.38 | 30.25 |
| KRH47782 | Soybean | cytosol | 28.52 | 30.12 |
| KRH06353 | Soybean | cytosol | 28.14 | 29.96 |
| HORVU2Hr1G123370.1 | Barley | cytosol, golgi, plasma membrane | 24.71 | 29.55 |
| HORVU2Hr1G073830.1 | Barley | extracellular, plasma membrane | 23.95 | 29.17 |
| HORVU6Hr1G083970.1 | Barley | endoplasmic reticulum, peroxisome, plasma membrane | 19.77 | 25.49 |
| HORVU5Hr1G040160.3 | Barley | golgi, peroxisome | 26.24 | 25.27 |
| HORVU5Hr1G026690.1 | Barley | nucleus | 17.87 | 22.6 |
| HORVU2Hr1G066420.1 | Barley | mitochondrion, plastid | 16.35 | 21.61 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G081610.1 | EnsemblPlantsGene:HORVU5Hr1G081610 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR31415 |
| PANTHER:PTHR31415:SF9 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B4851D5 | UniProt:A0A287S0D4 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr5H:-:565152247..565154028
Molecular Weight (calculated)
27540.4 Da
IEP (calculated)
10.304
GRAVY (calculated)
0.017
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MRCCARNAKA ESRRRRRAKT AHHKAPGKAP KSGATNDRSM ESSKKNLCEI HRGDWGGRRV LGASLLAAAV VAAVIALALF LVYRPMKPQA TVARAGVYRL
101: VSAAAPGANN SAPTPYALSA TVQFTLLLHN PSDRTAVTYD ALLAYVTYRG EMVAPPAQLP LVLQDPGADV GLSPLLGGDG GAPVPVSADA VDALRADCVA
201: GRVQLRLVVM GRVRYRSGPF KSAWRDLYVR CDAILGVTVQ AAAGGGGGGD VPLLEYPKCA VDA
101: VSAAAPGANN SAPTPYALSA TVQFTLLLHN PSDRTAVTYD ALLAYVTYRG EMVAPPAQLP LVLQDPGADV GLSPLLGGDG GAPVPVSADA VDALRADCVA
201: GRVQLRLVVM GRVRYRSGPF KSAWRDLYVR CDAILGVTVQ AAAGGGGGGD VPLLEYPKCA VDA
001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
Arabidopsis Description
At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.