Factsheet for HORVU1Hr1G058400.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

cytosol 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	cytosol
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G232200.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	90.84	93.7
TraesCS1B01G245500.1	Wheat	cytosol	89.31	92.49
TraesCS1D01G233500.1	Wheat	peroxisome	93.13	88.73
Os05t0367900-01	Rice	plastid	71.37	71.92
Zm00001d037915_P001	Maize	cytosol, peroxisome, plastid	60.31	60.31
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	38.93	50.75
OQU77870	Sorghum	plastid	58.78	48.28
VIT_15s0048g02530.t01	Wine grape	plasma membrane	35.5	46.04
KRG97253	Soybean	endoplasmic reticulum, extracellular, plasma membrane	32.06	42.64
KRH68967	Soybean	extracellular, plasma membrane	31.68	42.13
CDY51712	Canola	cytosol, peroxisome, plasma membrane	34.35	38.96
Bra037412.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.35	38.96
CDY07145	Canola	cytosol, peroxisome, plasma membrane	34.35	38.79
AT4G01410.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	33.59	38.77
Solyc10g005040.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	32.44	38.46
PGSC0003DMT400029400	Potato	cytosol, peroxisome, plastid, vacuole	32.82	37.72
CDX91852	Canola	cytosol, peroxisome, plasma membrane	32.82	37.55
Bra000927.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.06	36.68
CDX74380	Canola	cytosol, peroxisome, plasma membrane	32.06	36.68
HORVU5Hr1G081610.1	Barley	golgi, nucleus, plastid	35.11	34.98
KRH47782	Soybean	cytosol	32.44	34.14
KRH06353	Soybean	cytosol	32.06	34.01
HORVU7Hr1G078320.1	Barley	cytosol	27.48	33.33
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	27.48	32.73
HORVU4Hr1G021190.1	Barley	golgi, plasma membrane, plastid	25.57	31.46
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	23.66	28.7
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	22.52	27.31
HORVU2Hr1G040910.1	Barley	peroxisome	24.05	26.47
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	25.57	24.54
HORVU6Hr1G083970.1	Barley	endoplasmic reticulum, peroxisome, plasma membrane	17.56	22.55
HORVU2Hr1G066420.1	Barley	mitochondrion, plastid	16.79	22.11
HORVU5Hr1G026690.1	Barley	nucleus	16.41	20.67

Protein Annotations

EnsemblPlants:HORVU1Hr1G058400.1	EnsemblPlantsGene:HORVU1Hr1G058400	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:LEA_2
PANTHER:PTHR31415	PANTHER:PTHR31415:SF24	PFAM:PF03168	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B478644
UniProt:A0A287FSJ5	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:426775852..426777109

Molecular Weight (calculated)

27358.0 Da

IEP (calculated)

9.445

GRAVY (calculated)

0.182

Length

262 amino acids

Sequence
(BLAST)

001: MGEHHLPPEP ADHHKGGKAV IHADDLKPGH RRRRYNYSYY GDTGSRGALR TICSVLLLLI LLAGVIALVL YLVYRPNSPA FTVTNIAVYS LTNVTGPSAG
101: LPAAGVGAGA RAPYAVAASF QCALVIRNPS GRSSARYDRL TAYVVYRGEA ITAPAEMPPL VQDPDSAVVV APVIGDGGAT PVPVSPETAA ALANDVTYGV
201: VSLRVVLLGR VRFVSGPFRS GWRSMYARCD LLVGVRKGPG GVGASGVPEA PLFGNPSCNV DI

Best Arabidopsis Sequence Match ( AT4G01410.1 )
(BLAST)

001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV

Arabidopsis Description

At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.