Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d037915_P001 | Maize | cytosol, peroxisome, plastid | 70.22 | 85.5 |
| Os05t0367900-01 | Rice | plastid | 53.6 | 65.77 |
| HORVU1Hr1G058400.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 48.28 | 58.78 |
| TraesCS1B01G245500.1 | Wheat | cytosol | 46.08 | 58.1 |
| TraesCS1A01G232200.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 46.08 | 57.87 |
| TraesCS1D01G233500.1 | Wheat | peroxisome | 47.02 | 54.55 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 29.47 | 46.77 |
| VIT_15s0048g02530.t01 | Wine grape | plasma membrane | 26.65 | 42.08 |
| KRH68967 | Soybean | extracellular, plasma membrane | 23.82 | 38.58 |
| KRG97253 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 23.51 | 38.07 |
| AT4G01410.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 26.96 | 37.89 |
| Bra037412.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 27.27 | 37.66 |
| CDY51712 | Canola | cytosol, peroxisome, plasma membrane | 27.27 | 37.66 |
| EER99240 | Sorghum | golgi | 25.71 | 37.44 |
| CDY07145 | Canola | cytosol, peroxisome, plasma membrane | 26.96 | 37.07 |
| Bra000927.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 25.08 | 34.93 |
| CDX74380 | Canola | cytosol, peroxisome, plasma membrane | 25.08 | 34.93 |
| CDX91852 | Canola | cytosol, peroxisome, plasma membrane | 25.08 | 34.93 |
| KRH47782 | Soybean | cytosol | 25.08 | 32.13 |
| Solyc10g005040.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 21.94 | 31.67 |
| KRH06353 | Soybean | cytosol | 24.14 | 31.17 |
| PGSC0003DMT400029400 | Potato | cytosol, peroxisome, plastid, vacuole | 22.26 | 31.14 |
| EES13132 | Sorghum | cytosol | 20.69 | 30.14 |
| EES16682 | Sorghum | golgi, plasma membrane, plastid | 19.75 | 29.44 |
| EES08013 | Sorghum | golgi, plasma membrane, plastid | 19.44 | 28.97 |
| EES06921 | Sorghum | endoplasmic reticulum | 19.12 | 28.77 |
| EES14353 | Sorghum | cytosol, mitochondrion, peroxisome, plasma membrane | 19.12 | 28.5 |
| EES12138 | Sorghum | extracellular, golgi, plasma membrane | 17.87 | 25.79 |
| OQU84133 | Sorghum | endoplasmic reticulum, golgi, nucleus | 15.67 | 21.55 |
Protein Annotations
| EnsemblPlants:OQU77870 | EnsemblPlantsGene:SORBI_3009G115200 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR31415 |
| PANTHER:PTHR31415:SF24 | ProteinID:OQU77870 | ProteinID:OQU77870.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B8B9D33 |
| UniProt:A0A1Z5R2A3 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:45626601..45628151
Molecular Weight (calculated)
32975.5 Da
IEP (calculated)
8.749
GRAVY (calculated)
0.099
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MHADKGAHVT LSPFQSRLLP TPSTVCSVLC TYTTCPESSE VVKPTQVQKM AEHHHLPPEH PDHHHHKGGR KGVYADDVKP GSRGRSRYSY YYGGYGDGGG
101: GGAVRALCFA VLVLLLAVGI TLLVLYVVYR PSHPTFAVTS AAVLDLYNAT ASTNNNAAAA GAAPAALLAA SFQFTLVLGN PRGRSAARYD RLEAYVAYHG
201: EALTAPTPMP PLAQDAGTAV ATAPVLGAGV GGPPVPVSPD AAAALATDVA NAVLPLRVVL LGRVRFVHGP FHRGWHSLYA RCDVLLGVRK IGGTGAATGG
301: GGGVPQAPIL GDPNCNVDM
101: GGAVRALCFA VLVLLLAVGI TLLVLYVVYR PSHPTFAVTS AAVLDLYNAT ASTNNNAAAA GAAPAALLAA SFQFTLVLGN PRGRSAARYD RLEAYVAYHG
201: EALTAPTPMP PLAQDAGTAV ATAPVLGAGV GGPPVPVSPD AAAALATDVA NAVLPLRVVL LGRVRFVHGP FHRGWHSLYA RCDVLLGVRK IGGTGAATGG
301: GGGVPQAPIL GDPNCNVDM
001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
Arabidopsis Description
At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.