Subcellular Localization
min:
: max
Winner_takes_all: vacuole, cytosol, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- vacuole 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g005040.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 89.04 | 91.86 |
| KRG97253 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 50.88 | 58.88 |
| VIT_15s0048g02530.t01 | Wine grape | plasma membrane | 50.88 | 57.43 |
| KRH68967 | Soybean | extracellular, plasma membrane | 49.12 | 56.85 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 45.18 | 51.24 |
| CDX91852 | Canola | cytosol, peroxisome, plasma membrane | 44.74 | 44.54 |
| AT4G01410.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 44.3 | 44.49 |
| Bra000927.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 44.3 | 44.1 |
| CDX74380 | Canola | cytosol, peroxisome, plasma membrane | 44.3 | 44.1 |
| CDY07145 | Canola | cytosol, peroxisome, plasma membrane | 43.42 | 42.67 |
| CDY51712 | Canola | cytosol, peroxisome, plasma membrane | 42.98 | 42.42 |
| Bra037412.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 42.98 | 42.42 |
| KRH47782 | Soybean | cytosol | 44.74 | 40.96 |
| KRH06353 | Soybean | cytosol | 43.86 | 40.49 |
| TraesCS5D01G326100.1 | Wheat | cytosol, plasma membrane, vacuole | 33.77 | 34.38 |
| TraesCS5B01G320400.1 | Wheat | cytosol, plasma membrane, vacuole | 33.77 | 34.22 |
| TraesCS5A01G320200.1 | Wheat | cytosol, peroxisome, vacuole | 33.33 | 33.78 |
| TraesCS1A01G232200.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 37.28 | 33.46 |
| EER99240 | Sorghum | golgi | 32.02 | 33.33 |
| TraesCS1B01G245500.1 | Wheat | cytosol | 36.84 | 33.2 |
| Zm00001d021289_P001 | Maize | mitochondrion | 31.58 | 32.88 |
| HORVU1Hr1G058400.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 37.72 | 32.82 |
| Os09t0532200-00 | Rice | plastid | 31.14 | 32.57 |
| Os05t0367900-01 | Rice | plastid | 35.53 | 31.15 |
| TraesCS1D01G233500.1 | Wheat | peroxisome | 36.84 | 30.55 |
| HORVU5Hr1G081610.1 | Barley | golgi, nucleus, plastid | 34.21 | 29.66 |
| PGSC0003DMT400042351 | Potato | extracellular, plasma membrane | 27.19 | 29.38 |
| PGSC0003DMT400015090 | Potato | plasma membrane | 25.0 | 27.4 |
| PGSC0003DMT400050538 | Potato | plasma membrane | 25.0 | 27.27 |
| Zm00001d037915_P001 | Maize | cytosol, peroxisome, plastid | 30.7 | 26.72 |
| PGSC0003DMT400072342 | Potato | extracellular, plasma membrane | 24.12 | 26.07 |
| PGSC0003DMT400001571 | Potato | endoplasmic reticulum, nucleus, plasma membrane | 23.68 | 25.35 |
| OQU77870 | Sorghum | plastid | 31.14 | 22.26 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400029400 | EnsemblPlantsGene:PGSC0003DMG400011296 | EntrezGene:102602617 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LEA_2 | PANTHER:PTHR31415 | PANTHER:PTHR31415:SF9 | PFAM:PF03168 | PGSC:PGSC0003DMG400011296 | RefSeq:XP_006352626.1 |
| RefSeq:XP_006352627.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000294D065 | UniProt:M1ASR6 | MapMan:35.1 |
Description
Harpin-induced 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400011296]
Coordinates
chr10:+:132145..133345
Molecular Weight (calculated)
25293.4 Da
IEP (calculated)
10.067
GRAVY (calculated)
0.133
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDYDQQKIQ NESVGYPQKP SPLPSSINDP RKYPSSPTRS PAKTLCTFLL ILVILAGLVV LILWLVYRPH KPNFSLVGAA IYDLNVTSPP YMSTTMQFTV
101: LARNPNRRVR LDYGQFSAIV YYKGQAITPP VVLPPLFQKT KSTVILSPLI RGASVPVSVE VANGLLIDEV YGVVGLRLVL MGKMRYKAGI VKTKHYQVYV
201: KCDMLVGYKK GFMGQVPLLG SPDCQLDL
101: LARNPNRRVR LDYGQFSAIV YYKGQAITPP VVLPPLFQKT KSTVILSPLI RGASVPVSVE VANGLLIDEV YGVVGLRLVL MGKMRYKAGI VKTKHYQVYV
201: KCDMLVGYKK GFMGQVPLLG SPDCQLDL
001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
Arabidopsis Description
At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [plasma membrane,endoplasmic reticulum,peroxisome]
SUBAcon: [plasma membrane,endoplasmic reticulum,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.