Factsheet for Zm00001d021289_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99240	Sorghum	golgi	83.56	83.56
Os09t0532200-00	Rice	plastid	61.19	61.47
TraesCS5B01G320400.1	Wheat	cytosol, plasma membrane, vacuole	63.01	61.33
TraesCS5D01G326100.1	Wheat	cytosol, plasma membrane, vacuole	62.56	61.16
TraesCS5A01G320200.1	Wheat	cytosol, peroxisome, vacuole	62.56	60.89
HORVU5Hr1G081610.1	Barley	golgi, nucleus, plastid	60.73	50.57
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	40.64	44.28
VIT_15s0048g02530.t01	Wine grape	plasma membrane	34.7	37.62
Zm00001d016733_P001	Maize	extracellular, plasma membrane	29.68	34.57
KRG97253	Soybean	endoplasmic reticulum, extracellular, plasma membrane	30.59	34.01
KRH68967	Soybean	extracellular, plasma membrane	30.59	34.01
Zm00001d037915_P001	Maize	cytosol, peroxisome, plastid	40.18	33.59
Solyc10g005040.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	33.33	33.03
PGSC0003DMT400029400	Potato	cytosol, peroxisome, plastid, vacuole	32.88	31.58
CDX91852	Canola	cytosol, peroxisome, plasma membrane	32.88	31.44
Bra000927.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.42	31.0
CDX74380	Canola	cytosol, peroxisome, plasma membrane	32.42	31.0
AT4G01410.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	31.96	30.84
CDY51712	Canola	cytosol, peroxisome, plasma membrane	31.96	30.3
Bra037412.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.96	30.3
CDY07145	Canola	cytosol, peroxisome, plasma membrane	31.96	30.17
Zm00001d052776_P001	Maize	extracellular	29.22	30.05
Zm00001d023468_P001	Maize	extracellular	28.77	29.58
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	29.22	28.57
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	26.94	27.83
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	28.31	27.56
Zm00001d026664_P001	Maize	extracellular	26.48	26.24
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	25.57	26.17
KRH47782	Soybean	cytosol	29.22	25.7
KRH06353	Soybean	cytosol	27.85	24.7

Protein Annotations

EMBL:BT085011	EnsemblPlants:Zm00001d021289_P001	EnsemblPlants:Zm00001d021289_T001	EnsemblPlantsGene:Zm00001d021289	EntrezGene:100501311	InterPro:LEA_2
PANTHER:PTHR31415	PANTHER:PTHR31415:SF9	PFAM:PF03168	ProteinID:ONM56740.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0001A4C6F9	UniProt:C4J2G4	MapMan:35.2	:	:	:

Description

Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Coordinates

chr7:-:147999944..148000603

Molecular Weight (calculated)

23007.9 Da

IEP (calculated)

9.382

GRAVY (calculated)

0.216

Length

219 amino acids

Sequence
(BLAST)

001: MGKQLCDMHR SRRRARIVAA ALLSAFAAAA AALTVYLVFR PLKPQASVVR VAVYRMATAA GNSSEGRAPP PYTLAASARF TALLHNPSDR AVVFYDGLFA
101: YVTYRGEMVA PPAPLPGVAQ GRGADVALSP HFGLGGAVPV PVSADAAQAL EGDCAAGRVE LRLVVMGRVK YMSGPFRTGW RGLYLRCDVT VGLWVDATAG
201: DDGAGDVPLL EYPKCSVDA

Best Arabidopsis Sequence Match ( AT4G01410.1 )
(BLAST)

001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV

Arabidopsis Description

At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.