Factsheet for TraesCS5A01G320200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

vacuole 1
mitochondrion 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome, vacuole
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G320400.1	Wheat	cytosol, plasma membrane, vacuole	95.11	95.11
TraesCS5D01G326100.1	Wheat	cytosol, plasma membrane, vacuole	94.22	94.64
HORVU5Hr1G081610.1	Barley	golgi, nucleus, plastid	90.67	77.57
Os09t0532200-00	Rice	plastid	63.11	65.14
Zm00001d021289_P001	Maize	mitochondrion	60.89	62.56
EER99240	Sorghum	golgi	55.56	57.08
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	41.78	46.77
KRH68967	Soybean	extracellular, plasma membrane	34.67	39.59
VIT_15s0048g02530.t01	Wine grape	plasma membrane	34.67	38.61
KRG97253	Soybean	endoplasmic reticulum, extracellular, plasma membrane	33.33	38.07
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	33.33	35.05
TraesCS1A01G232200.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	38.67	34.25
Solyc10g005040.2.1	Tomato	cytosol, endoplasmic reticulum, plasma membrane	33.33	33.94
AT4G01410.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	34.22	33.92
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	31.11	33.65
PGSC0003DMT400029400	Potato	cytosol, peroxisome, plastid, vacuole	33.78	33.33
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	31.56	33.02
Bra000927.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.33	32.75
CDX91852	Canola	cytosol, peroxisome, plasma membrane	33.33	32.75
CDX74380	Canola	cytosol, peroxisome, plasma membrane	33.33	32.75
CDY51712	Canola	cytosol, peroxisome, plasma membrane	33.33	32.47
Bra037412.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.33	32.47
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	31.11	32.41
CDY07145	Canola	cytosol, peroxisome, plasma membrane	32.89	31.9
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	29.78	31.46
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	29.33	30.56
KRH47782	Soybean	cytosol	33.78	30.52
KRH06353	Soybean	cytosol	33.33	30.36
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	28.89	29.41
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	27.11	27.35
TraesCS6A01G349800.1	Wheat	endoplasmic reticulum	23.11	25.49
TraesCS5A01G098600.1	Wheat	cytosol, endoplasmic reticulum, nucleus	20.89	22.38
TraesCS7A01G440300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	19.11	21.29

Protein Annotations

EnsemblPlants:TraesCS5A01G320200.1	EnsemblPlantsGene:TraesCS5A01G320200	PANTHER:PTHR31415	PANTHER:PTHR31415:SF9	SEG:seg	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:533287241..533287918

Molecular Weight (calculated)

23501.5 Da

IEP (calculated)

9.374

GRAVY (calculated)

0.271

Length

225 amino acids

Sequence
(BLAST)

001: MESSKKNLCE IHRGDGRRRR ALAASLLATA VFAAIIALAL FLVYRPAKPQ ATVARAGVYR LVSAAAANGT NSSAATPYAL SATVQFTLLL HNPSDRTAVV
101: YDRLLAYVTY RGEMVAPPAQ LPLVLQDPGA DVAMSPLLGG DGGAPVPVSA DAVDALHADC VAGRVQLRLV VMGRVRYRSG PFKSAWRDLY VRCDAILGLT
201: VQAAAGGGGA GDVPLLEYPK CAVDA

Best Arabidopsis Sequence Match ( AT4G01410.1 )
(BLAST)

001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV

Arabidopsis Description

At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.