Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037412.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 100.0 | 100.0 |
| CDY07145 | Canola | cytosol, peroxisome, plasma membrane | 98.27 | 97.84 |
| AT4G01410.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 88.74 | 90.31 |
| CDX74380 | Canola | cytosol, peroxisome, plasma membrane | 87.45 | 88.21 |
| CDX91852 | Canola | cytosol, peroxisome, plasma membrane | 87.01 | 87.77 |
| KRG97253 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 46.75 | 54.82 |
| KRH68967 | Soybean | extracellular, plasma membrane | 46.75 | 54.82 |
| VIT_15s0048g02530.t01 | Wine grape | plasma membrane | 47.62 | 54.46 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 41.56 | 47.76 |
| Solyc10g005040.2.1 | Tomato | cytosol, endoplasmic reticulum, plasma membrane | 43.72 | 45.7 |
| PGSC0003DMT400029400 | Potato | cytosol, peroxisome, plastid, vacuole | 42.42 | 42.98 |
| KRH06353 | Soybean | cytosol | 41.56 | 38.87 |
| KRH47782 | Soybean | cytosol | 41.56 | 38.55 |
| TraesCS1A01G232200.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 39.39 | 35.83 |
| TraesCS1B01G245500.1 | Wheat | cytosol | 38.96 | 35.57 |
| Os05t0367900-01 | Rice | plastid | 39.39 | 35.0 |
| HORVU1Hr1G058400.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 38.96 | 34.35 |
| TraesCS5A01G320200.1 | Wheat | cytosol, peroxisome, vacuole | 32.47 | 33.33 |
| TraesCS5B01G320400.1 | Wheat | cytosol, plasma membrane, vacuole | 32.47 | 33.33 |
| TraesCS5D01G326100.1 | Wheat | cytosol, plasma membrane, vacuole | 32.03 | 33.04 |
| TraesCS1D01G233500.1 | Wheat | peroxisome | 38.96 | 32.73 |
| Os09t0532200-00 | Rice | plastid | 30.74 | 32.57 |
| Zm00001d037915_P001 | Maize | cytosol, peroxisome, plastid | 36.36 | 32.06 |
| Zm00001d021289_P001 | Maize | mitochondrion | 30.3 | 31.96 |
| EER99240 | Sorghum | golgi | 29.87 | 31.51 |
| CDY69513 | Canola | plasma membrane | 25.54 | 28.64 |
| CDY08687 | Canola | plasma membrane | 25.54 | 28.64 |
| CDX92375 | Canola | plasma membrane | 25.11 | 28.02 |
| CDY29084 | Canola | mitochondrion | 20.78 | 27.91 |
| HORVU5Hr1G081610.1 | Barley | golgi, nucleus, plastid | 31.6 | 27.76 |
| CDY01043 | Canola | mitochondrion | 25.11 | 27.36 |
| CDY08506 | Canola | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 25.11 | 27.36 |
| OQU77870 | Sorghum | plastid | 37.66 | 27.27 |
| CDX98590 | Canola | plasma membrane | 24.24 | 27.05 |
| CDY69198 | Canola | cytosol | 24.24 | 26.92 |
| CDY68967 | Canola | cytosol | 24.24 | 26.92 |
| CDX90600 | Canola | plasma membrane | 24.24 | 26.92 |
| CDY72430 | Canola | cytosol | 24.24 | 26.92 |
| CDY20226 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 24.68 | 26.76 |
| CDY14357 | Canola | plastid | 24.68 | 26.76 |
| CDY40419 | Canola | plasma membrane | 23.81 | 26.44 |
| CDY32068 | Canola | plasma membrane | 23.38 | 26.21 |
| CDY28821 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 23.81 | 25.82 |
| CDY51789 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 23.81 | 25.82 |
| CDY35671 | Canola | plasma membrane | 22.08 | 24.4 |
| CDY55755 | Canola | plasma membrane | 22.08 | 23.94 |
| CDY09123 | Canola | plasma membrane | 21.64 | 23.92 |
| CDX81001 | Canola | plastid | 21.64 | 23.26 |
| CDX95339 | Canola | plasma membrane | 22.94 | 17.79 |
Protein Annotations
| EnsemblPlants:CDY51712 | EnsemblPlantsGene:GSBRNA2T00004063001 | GO:A0A078IP57 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LEA_2 | PANTHER:PTHR31415 | PANTHER:PTHR31415:SF9 | PFAM:PF03168 | ProteinID:CDY51712 | ProteinID:CDY51712.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0002542084 | UniProt:A0A078IP57 | MapMan:35.1 | : |
Description
BnaA09g51990DBnaA09g51990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP57]
Coordinates
chrLK033021:-:16524..17443
Molecular Weight (calculated)
24685.1 Da
IEP (calculated)
9.873
GRAVY (calculated)
0.034
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEGEAKAEQ AAKADHKNAP SASSTPESYS KDSEGGGGGG GGDALRAICG AVFTILVLLG IIALILWLVY RPHKPRLTVV GAAIYDLNFT TPPLISTSVQ
101: FSVMARNPNR RVSIRYDKLS MYVTYRDQII TPPLPLPPLR MGHKSTVVIA PVLGGDGIPV SPEVANGLKS DEANGAVMMR VVVLGRLRWK AGAIKTGRYG
201: FYATCDVWMR FDRSSNGQVP LLAPSTCKVD V
101: FSVMARNPNR RVSIRYDKLS MYVTYRDQII TPPLPLPPLR MGHKSTVVIA PVLGGDGIPV SPEVANGLKS DEANGAVMMR VVVLGRLRWK AGAIKTGRYG
201: FYATCDVWMR FDRSSNGQVP LLAPSTCKVD V
001: MGEGEAKAEH AAKADHKNAP SASSTPESYS KEGGGGGGDA RRAICGAIFT ILVILGIIAL ILWLVYRPHK PRLTVVGAAI YDLNFTAPPL ISTSVQFSVL
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
101: ARNPNRRVSI HYDKLSMYVT YKDQIITPPL PLPPLRLGHK STVVIAPVMG GNGIPVSPEV ANGLKNDEAY GVVLMRVVIF GRLRWKAGAI KTGRYGFYAR
201: CDVWLRFNPS SNGQVPLLAP STCKVDV
Arabidopsis Description
At4g01410 [Source:UniProtKB/TrEMBL;Acc:Q9M132]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.