CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 2
plasma membrane 2
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017276.1-P	Field mustard	plasma membrane	100.0	100.0
CDY32068	Canola	plasma membrane	95.19	96.12
AT2G35960.1	Thale cress	endoplasmic reticulum, golgi, plasma membrane	81.73	80.95
CDX90600	Canola	plasma membrane	76.92	76.92
CDY72430	Canola	cytosol	75.48	75.48
CDY69198	Canola	cytosol	74.04	74.04
CDY68967	Canola	cytosol	74.04	74.04
CDY29084	Canola	mitochondrion	61.06	73.84
AT2G35970.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	71.15	70.14
AT4G09590.1	Thale cress	cytosol, plasma membrane, vacuole	71.15	70.14
CDY08506	Canola	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	63.46	62.26
CDY01043	Canola	mitochondrion	62.5	61.32
KRH72197	Soybean	plasma membrane	55.29	55.56
KRH32836	Soybean	plasma membrane	55.29	55.02
VIT_08s0007g02350.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	53.85	54.11
KRG96252	Soybean	plasma membrane	53.37	52.86
CDY69513	Canola	plasma membrane	50.96	51.46
CDX95339	Canola	plasma membrane	73.56	51.34
CDY08687	Canola	plasma membrane	50.48	50.97
Solyc01g007220.2.1	Tomato	extracellular, plasma membrane	50.96	50.24
PGSC0003DMT400042351	Potato	extracellular, plasma membrane	49.52	48.82
CDY55755	Canola	plasma membrane	49.04	47.89
CDX81001	Canola	plastid	48.56	46.98
GSMUA_Achr9P08960_001	Banana	plasma membrane	47.12	46.67
CDY35671	Canola	plasma membrane	46.63	46.41
PGSC0003DMT400072342	Potato	extracellular, plasma membrane	46.15	45.5
CDX92375	Canola	plasma membrane	45.19	45.41
CDX98590	Canola	plasma membrane	45.19	45.41
CDY09123	Canola	plasma membrane	45.19	44.98
GSMUA_Achr8P34450_001	Banana	plasma membrane	43.75	43.54
KRH67997	Soybean	plastid	52.4	43.25
GSMUA_Achr10P...	Banana	plasma membrane	43.27	42.65
GSMUA_AchrUn_...	Banana	cytosol, plasma membrane, plastid	43.75	42.52
TraesCS5A01G125800.1	Wheat	golgi, plasma membrane, plastid	41.35	41.35
TraesCS5D01G133400.1	Wheat	golgi, plasma membrane, plastid	41.35	41.35
GSMUA_Achr6P19500_001	Banana	endoplasmic reticulum, plasma membrane	41.83	41.23
TraesCS5B01G125000.1	Wheat	cytosol, extracellular, plasma membrane	34.62	41.14
Os12t0159600-01	Rice	plastid	41.83	41.04
GSMUA_Achr9P29670_001	Banana	cytosol, extracellular, mitochondrion, plasma membrane	34.62	40.91
GSMUA_Achr7P03290_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	41.83	40.85
GSMUA_Achr11P...	Banana	cytosol, extracellular, mitochondrion, peroxisome	35.1	40.78
GSMUA_Achr6P35580_001	Banana	cytosol, extracellular, plastid	18.75	40.62
Os11t0157200-03	Rice	plasma membrane	40.87	40.48
TraesCS5B01G124900.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	39.9	39.9
TraesCS7B01G227800.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	41.35	39.81
HORVU7Hr1G078320.1	Barley	cytosol	41.35	39.81
Zm00001d041927_P001	Maize	endoplasmic reticulum, golgi, plasma membrane	40.38	39.62
Zm00001d016733_P001	Maize	extracellular, plasma membrane	35.58	39.36
TraesCS7A01G327200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	40.87	39.35
TraesCS7D01G323900.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	40.87	39.35
TraesCS4D01G113300.1	Wheat	peroxisome, plasma membrane, plastid	39.9	38.97
TraesCS4B01G115700.1	Wheat	peroxisome, plasma membrane, plastid	39.9	38.97
TraesCS4A01G199700.1	Wheat	golgi, plasma membrane, plastid	39.9	38.97
Zm00001d023468_P001	Maize	extracellular	39.9	38.97
TraesCS5D01G133300.1	Wheat	cytosol	38.94	38.94
EES16682	Sorghum	golgi, plasma membrane, plastid	39.9	38.78
Zm00001d052776_P001	Maize	extracellular	39.42	38.5
HORVU4Hr1G021190.1	Barley	golgi, plasma membrane, plastid	38.94	38.03
Os08t0102700-01	Rice	cytosol, peroxisome, plasma membrane	40.87	37.44
EES13132	Sorghum	cytosol	39.42	37.44
EES08013	Sorghum	golgi, plasma membrane, plastid	38.46	37.38
Zm00001d034977_P001	Maize	cytosol, mitochondrion, peroxisome, plasma membrane	38.46	37.38
Os04t0685400-01	Rice	golgi, plasma membrane, plastid	39.42	37.27
EES06921	Sorghum	endoplasmic reticulum	37.02	36.32
Zm00001d026664_P001	Maize	extracellular	38.46	36.2
TraesCS2D01G596200.1	Wheat	cytosol, golgi, plasma membrane	38.46	36.2
EES14353	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	37.02	35.98
TraesCS2A01G583600.1	Wheat	cytosol, golgi, plasma membrane	37.98	35.75
TraesCS2B01G603000.1	Wheat	cytosol, golgi, plasma membrane	37.98	35.75
TraesCS2B01G313900.1	Wheat	extracellular, plasma membrane	36.54	35.19
TraesCS2D01G295700.1	Wheat	extracellular, plasma membrane	36.54	35.19
HORVU2Hr1G073830.1	Barley	extracellular, plasma membrane	36.54	35.19
HORVU2Hr1G123370.1	Barley	cytosol, golgi, plasma membrane	37.02	35.0
TraesCS2A01G297700.1	Wheat	extracellular, plasma membrane	36.06	34.72
Zm00001d003751_P001	Maize	extracellular, golgi, plasma membrane	37.5	34.67
TraesCS2A01G205300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	35.58	34.42
TraesCS2D01G210700.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	35.58	34.42
TraesCS2B01G232700.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	35.58	34.42
EES12138	Sorghum	extracellular, golgi, plasma membrane	36.54	34.39
TraesCS5D01G498400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	35.1	34.11
TraesCS5A01G484900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	35.1	34.11
TraesCS5B01G498200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	35.1	34.11
Os04t0416700-01	Rice	golgi, plasma membrane	36.06	34.09
Os02t0538700-01	Rice	cytosol, endoplasmic reticulum, plasma membrane	36.54	33.93
TraesCS5A01G125600.1	Wheat	cytosol, peroxisome, plasma membrane	36.06	33.63
Zm00001d025371_P001	Maize	extracellular, golgi, plasma membrane	35.58	33.04
HORVU5Hr1G114220.1	Barley	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	34.13	32.87
HORVU5Hr1G040160.3	Barley	golgi, peroxisome	42.31	32.23
CDY20226	Canola	endoplasmic reticulum, nucleus, plasma membrane	32.69	31.92
CDY14357	Canola	plastid	32.69	31.92
HORVU2Hr1G040910.1	Barley	peroxisome	35.58	31.09
CDY51789	Canola	endoplasmic reticulum, nucleus, plasma membrane	31.73	30.99
CDY28821	Canola	endoplasmic reticulum, nucleus, plasma membrane	31.73	30.99
HORVU2Hr1G066420.1	Barley	mitochondrion, plastid	23.08	24.12
CDX91852	Canola	cytosol, peroxisome, plasma membrane	26.44	24.02
CDY51712	Canola	cytosol, peroxisome, plasma membrane	26.44	23.81
CDY07145	Canola	cytosol, peroxisome, plasma membrane	26.44	23.71
CDX74380	Canola	cytosol, peroxisome, plasma membrane	25.96	23.58

Protein Annotations

EnsemblPlants:CDY40419	EnsemblPlantsGene:GSBRNA2T00069625001	GO:A0A078HT19	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LEA_2	PANTHER:PTHR31415	PANTHER:PTHR31415:SF2	PFAM:PF03168	ProteinID:CDY40419	ProteinID:CDY40419.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002543E63	UniProt:A0A078HT19	MapMan:35.1	:

Description

BnaA04g20980DBnaA04g20980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HT19]

Coordinates

chrLK032470:-:30684..31666

Molecular Weight (calculated)

23281.3 Da

IEP (calculated)

9.766

GRAVY (calculated)

0.064

Length

208 amino acids

Sequence
(BLAST)

001: MSRDCEKHGG GGGGTARRIC VVIIGFIIIV SITIFLVWVI LQPKKPRFIL QDATVYAFNL TQPNLLTSNF QVTLVIRNRN SKIGIYYDRL HVYATYRNQQ
101: ITFPTAIPPT YQGHKEDSVW SPIIYGNAVS VAPYNAVALG DEQSRGFVEL VIRADGRVRW KVGTLITGKY HLHVRCHAYI NLADKSNGVI VGENIVKYTV
201: DNQCSVNV

Best Arabidopsis Sequence Match ( AT2G35960.1 )
(BLAST)

001: MTTKDCGNHG GGGGGGTASR ICGVIIGFII IVLITIFLVW IILQPTKPRF ILQDATVYAF NLSQPNLLTS NFQITIASRN RNSRIGIYYD RLHVYATYRN
101: QQITLRTAIP PTYQGHKEDN VWSPFVYGNS VPIAPFNAVA LGDEQNRGFV TLIIRADGRV RWKVGTLITG KYHLHVRCQA FINLADKAAG VHVGENAVKY
201: MLINKCSVNV

Arabidopsis Description

NHL12NDR1/HIN1-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ54]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.